[ARVADOS] updated: d170d92ce35f402b68fc07c7cbeed2d215685837

[Git user]

Summary of changes:
 sdk/cwl/arvados_cwl/__init__.py | 2 +-
 sdk/cwl/setup.py                | 2 +-
 2 files changed, 2 insertions(+), 2 deletions(-)

       via  d170d92ce35f402b68fc07c7cbeed2d215685837 (commit)
       via  b8260eb5cdc2c403083d7dbea49c45791a763e9c (commit)
      from  9bccc21498bab7e1300af17c5844f868f119bb9c (commit)

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commit d170d92ce35f402b68fc07c7cbeed2d215685837
Author: Peter Amstutz <peter.amstutz at curoverse.com>
Date:   Tue Mar 22 16:23:48 2016 -0400

    8654: Bump cwltool version

diff --git a/sdk/cwl/setup.py b/sdk/cwl/setup.py
index 45c2cf8..24d9102 100644
--- a/sdk/cwl/setup.py
+++ b/sdk/cwl/setup.py
@@ -30,7 +30,7 @@ setup(name='arvados-cwl-runner',
           'bin/arvados-cwl-runner'
       ],
       install_requires=[
-          'cwltool>=1.0.20160311170456',
+          'cwltool>=1.0.20160322201127',
           'arvados-python-client>=0.1.20160322001610'
       ],
       test_suite='tests',

commit b8260eb5cdc2c403083d7dbea49c45791a763e9c
Author: Peter Amstutz <peter.amstutz at curoverse.com>
Date:   Tue Mar 22 16:22:53 2016 -0400

    8654: Use iterator instead of readlines() when going through job log file.

diff --git a/sdk/cwl/arvados_cwl/__init__.py b/sdk/cwl/arvados_cwl/__init__.py
index 432ceac..67d0d4e 100644
--- a/sdk/cwl/arvados_cwl/__init__.py
+++ b/sdk/cwl/arvados_cwl/__init__.py
@@ -215,7 +215,7 @@ class ArvadosJob(object):
                     tmpdir = None
                     outdir = None
                     keepdir = None
-                    for l in log.readlines():
+                    for l in log:
                         g = tmpdirre.match(l)
                         if g:
                             tmpdir = g.group(1)

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