[ARVADOS] updated: fbc5ee7656bb337f15b3b2b7c88473f29f40c8b0
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Tue Jun 21 12:02:03 EDT 2016
Summary of changes:
crunch_scripts/cwl-runner | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
via fbc5ee7656bb337f15b3b2b7c88473f29f40c8b0 (commit)
from c9b5db991553e3a6eb6ec1f268e94f4a7b2a64d0 (commit)
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commit fbc5ee7656bb337f15b3b2b7c88473f29f40c8b0
Author: Peter Amstutz <peter.amstutz at curoverse.com>
Date: Tue Jun 21 12:01:57 2016 -0400
8442: cwl-runner crunch script must provide work_api parameter to ArvCwlRunner
constructor.
diff --git a/crunch_scripts/cwl-runner b/crunch_scripts/cwl-runner
index c786fc1..71ba68d 100755
--- a/crunch_scripts/cwl-runner
+++ b/crunch_scripts/cwl-runner
@@ -47,7 +47,7 @@ try:
adjustFiles(job_order_object, keeppath)
- runner = arvados_cwl.ArvCwlRunner(api_client=arvados.api('v1', model=OrderedJsonModel()))
+ runner = arvados_cwl.ArvCwlRunner(api_client=arvados.api('v1', model=OrderedJsonModel()), work_api="jobs")
t = load_tool(job_order_object, runner.arvMakeTool)
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