[ARVADOS] updated: d199bf8a0732563a65f19538c6fa66b00f820f66

[git at public.curoverse.com]

Summary of changes:
 .../controllers/pipeline_instances_controller.rb   |   6 --
 .../app/helpers/pipeline_components_helper.rb      |   3 +-
 .../app/helpers/pipeline_instances_helper.rb       |   1 +
 apps/workbench/app/helpers/provenance_helper.rb    |   5 -
 apps/workbench/app/models/pipeline_instance.rb     |  14 +++
 .../views/application/_job_status_label.html.erb   |   4 +-
 .../collections/_show_source_summary.html.erb      |   9 +-
 .../workbench/app/views/jobs/_show_status.html.erb |   4 +-
 .../_show_components_running.html.erb              |  12 ++-
 .../schema/PipelineTemplate.html.textile.liquid    |  10 +-
 .../pipeline_templates/gatk-exome-fq-snp.json      |  14 +--
 .../running-external-program.html.textile.liquid   |   1 -
 .../tutorial-submit-job.html.textile.liquid        |   1 -
 sdk/cli/bin/arv-run-pipeline-instance              |  58 ++++++------
 sdk/cli/bin/crunch-job                             |  26 +----
 services/api/Gemfile                               |   2 +-
 services/api/Gemfile.lock                          |   6 +-
 services/api/app/models/job.rb                     |   1 -
 ...826180337_remove_output_is_persistent_column.rb |   9 ++
 services/api/db/structure.sql                      |   5 +-
 services/keepstore/handler_test.go                 | 105 +++++++++++++++++++++
 services/keepstore/handlers.go                     |  82 +++++++++++++++-
 services/keepstore/keepstore.go                    |  24 ++++-
 services/keepstore/pull_list/pull_list.go          |  81 ++++++++++++++++
 24 files changed, 380 insertions(+), 103 deletions(-)
 create mode 100644 services/api/db/migrate/20140826180337_remove_output_is_persistent_column.rb
 create mode 100644 services/keepstore/pull_list/pull_list.go

       via  d199bf8a0732563a65f19538c6fa66b00f820f66 (commit)
       via  a3755ca0b2ee6b7194f02b368d44cf08d25272ce (commit)
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       via  0042e4b42d9f4d3900aefc68617cb28c5a61a522 (commit)
       via  3630931ac1ec775014bbcfb0f09d0d77cd289b7f (commit)
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       via  902e9ebf894c9b45825f2ae8739a9e546e486fb1 (commit)
       via  7c8e8d37dd25880627a8faabd56eba888ed194b8 (commit)
       via  cf5ffa1f9c3d24fe828cee0993a2e7870719f7e7 (commit)
       via  24c42c71335a426b1838d04698bfbcf4db39e086 (commit)
       via  20fec88ce889c3aa0eb020361f4001c362438283 (commit)
       via  6c29e76287d9df651a0bc54d7c0a7a4611862ada (commit)
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       via  12d2dafabb0d74f7ef9c9b929a5e8fa6b2655190 (commit)
      from  2b43d13d95893044467a96e3a0032aef36d65f03 (commit)

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commit d199bf8a0732563a65f19538c6fa66b00f820f66
Merge: 2b43d13 a3755ca
Author: radhika <radhika at curoverse.com>
Date:   Thu Aug 28 09:29:21 2014 -0400

    Merge branch 'master' into 3339-truncate-project-descriptions


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