[GET-dev] Blosum100 matrix correct in GET?

[Kimberly Robasky]

I sent this to Tom & Sasha initially, and Xaodi is looking into it,
but Sasha encouraged me to post it here (where Xaodi can post a response):

G->A, G->V, G->R in Blosum100 from NCBI are, respectively, -1, -8, -6:
ftp://ftp.ncbi.nih.gov/blast/matrices/BLOSUM100

But on GET, its 1, 5, 4:
http://evidence.personalgenomes.org/RHO-G51A
http://evidence.personalgenomes.org/RHO-G51V
http://evidence.personalgenomes.org/RHO-G51R

What am I missing?
-Kim