[ARVADOS] updated: 2.1.0-2164-g32c9b81e2

[Git user]

Summary of changes:
 sdk/python/arvados/arvfile.py | 15 +++++++++++----
 sdk/python/arvados/keep.py    | 13 ++++++++-----
 2 files changed, 19 insertions(+), 9 deletions(-)

       via  32c9b81e2c1bce19673c73cb14490f6e9dde0fc6 (commit)
      from  ff635ccb09b0b79663b0220e16b8a0ef00997f5d (commit)

Those revisions listed above that are new to this repository have
not appeared on any other notification email; so we list those
revisions in full, below.


commit 32c9b81e2c1bce19673c73cb14490f6e9dde0fc6
Author: Peter Amstutz <peter.amstutz at curii.com>
Date:   Tue Mar 29 15:42:11 2022 +0000

    18941: bugfixing prefetch
    
    Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz at curii.com>

diff --git a/sdk/python/arvados/arvfile.py b/sdk/python/arvados/arvfile.py
index 0fcdc1e63..b21ebd331 100644
--- a/sdk/python/arvados/arvfile.py
+++ b/sdk/python/arvados/arvfile.py
@@ -479,7 +479,7 @@ class _BlockManager(object):
     """
 
     DEFAULT_PUT_THREADS = 2
-    DEFAULT_GET_THREADS = 2
+    DEFAULT_GET_THREADS = 4
 
     def __init__(self, keep, copies=None, put_threads=None, num_retries=None, storage_classes_func=None):
         """keep: KeepClient object to use"""
@@ -593,6 +593,9 @@ class _BlockManager(object):
                 b = self._prefetch_queue.get()
                 if b is None:
                     return
+                if self._keep.has_cache_slot(b):
+                    continue
+                _logger.debug("prefetching %s", b)
                 self._keep.get(b)
             except Exception:
                 _logger.exception("Exception doing block prefetch")
@@ -841,7 +844,7 @@ class _BlockManager(object):
         if not self.prefetch_enabled:
             return
 
-        if self._keep.get_from_cache(locator) is not None:
+        if self._keep.has_cache_slot(locator):
             return
 
         with self.lock:
@@ -849,6 +852,7 @@ class _BlockManager(object):
                 return
 
         self.start_get_threads()
+        # _logger.debug("pushing %s to prefetch", locator)
         self._prefetch_queue.put(locator)
 
 
@@ -1099,7 +1103,7 @@ class ArvadosFile(object):
             if size == 0 or offset >= self.size():
                 return b''
             readsegs = locators_and_ranges(self._segments, offset, size)
-            prefetch = locators_and_ranges(self._segments, offset + size, config.KEEP_BLOCK_SIZE, limit=32)
+            prefetch = locators_and_ranges(self._segments, offset + size, config.KEEP_BLOCK_SIZE*4, limit=32)
 
         locs = set()
         data = []
@@ -1117,7 +1121,10 @@ class ArvadosFile(object):
                 self.parent._my_block_manager().block_prefetch(lr.locator)
                 locs.add(lr.locator)
 
-        return b''.join(data)
+        if len(data) == 1:
+            return data[0]
+        else:
+            return b''.join(data)
 
     @must_be_writable
     @synchronized
diff --git a/sdk/python/arvados/keep.py b/sdk/python/arvados/keep.py
index 1a83eae94..df01c3a55 100644
--- a/sdk/python/arvados/keep.py
+++ b/sdk/python/arvados/keep.py
@@ -176,7 +176,7 @@ class Keep(object):
 
 class KeepBlockCache(object):
     # Default RAM cache is 256MiB
-    def __init__(self, cache_max=(256 * 1024 * 1024)):
+    def __init__(self, cache_max=(1024 * 1024 * 1024)):
         self.cache_max = cache_max
         self._cache = []
         self._cache_lock = threading.Lock()
@@ -1036,14 +1036,19 @@ class KeepClient(object):
         else:
             return None
 
-    def get_from_cache(self, loc):
+    def get_from_cache(self, loc_s):
         """Fetch a block only if is in the cache, otherwise return None."""
-        slot = self.block_cache.get(loc)
+        locator = KeepLocator(loc_s)
+        slot = self.block_cache.get(locator.md5sum)
         if slot is not None and slot.ready.is_set():
             return slot.get()
         else:
             return None
 
+    def has_cache_slot(self, loc_s):
+        locator = KeepLocator(loc_s)
+        return self.block_cache.get(locator.md5sum) is not None
+
     def refresh_signature(self, loc):
         """Ask Keep to get the remote block and return its local signature"""
         now = datetime.datetime.utcnow().isoformat("T") + 'Z'
@@ -1333,5 +1338,3 @@ class KeepClient(object):
         if os.path.exists(os.path.join(self.local_store, locator.md5sum)):
             return True
 
-    def is_cached(self, locator):
-        return self.block_cache.reserve_cache(expect_hash)

-----------------------------------------------------------------------


hooks/post-receive
--