[arvados] updated: 2.1.0-3209-g9b0de8314
git repository hosting
git at public.arvados.org
Thu Dec 15 22:14:25 UTC 2022
Summary of changes:
doc/Rakefile | 5 +-
sdk/R/DESCRIPTION | 6 +-
sdk/R/R/Arvados.R | 7270 +++++++++-----------
sdk/R/R/ArvadosFile.R | 128 +-
sdk/R/R/ArvadosR.R | 24 +
sdk/R/R/Collection.R | 284 +-
sdk/R/R/HttpRequest.R | 1 -
sdk/R/R/RESTService.R | 13 +-
sdk/R/R/Subcollection.R | 82 +-
sdk/R/README.Rmd | 339 -
sdk/R/README.md | 374 +
sdk/R/man/Arvados.Rd | 3117 ++++++++-
sdk/R/man/ArvadosFile.Rd | 493 +-
sdk/R/man/ArvadosR.Rd | 21 +
sdk/R/man/Collection.Rd | 480 +-
sdk/R/man/Subcollection.Rd | 299 +-
sdk/R/man/api_client_authorizations.create.Rd | 20 -
...api_client_authorizations.create_system_auth.Rd | 20 -
sdk/R/man/api_client_authorizations.current.Rd | 14 -
sdk/R/man/api_client_authorizations.delete.Rd | 17 -
sdk/R/man/api_client_authorizations.get.Rd | 17 -
sdk/R/man/api_client_authorizations.list.Rd | 34 -
sdk/R/man/api_client_authorizations.update.Rd | 20 -
sdk/R/man/api_clients.create.Rd | 20 -
sdk/R/man/api_clients.delete.Rd | 17 -
sdk/R/man/api_clients.get.Rd | 17 -
sdk/R/man/api_clients.list.Rd | 34 -
sdk/R/man/api_clients.update.Rd | 20 -
sdk/R/man/authorized_keys.create.Rd | 20 -
sdk/R/man/authorized_keys.delete.Rd | 17 -
sdk/R/man/authorized_keys.get.Rd | 17 -
sdk/R/man/authorized_keys.list.Rd | 34 -
sdk/R/man/authorized_keys.update.Rd | 20 -
sdk/R/man/collections.create.Rd | 20 -
sdk/R/man/collections.delete.Rd | 17 -
sdk/R/man/collections.get.Rd | 17 -
sdk/R/man/collections.list.Rd | 36 -
sdk/R/man/collections.provenance.Rd | 17 -
sdk/R/man/collections.trash.Rd | 17 -
sdk/R/man/collections.untrash.Rd | 17 -
sdk/R/man/collections.update.Rd | 20 -
sdk/R/man/collections.used_by.Rd | 17 -
sdk/R/man/container_requests.create.Rd | 20 -
sdk/R/man/container_requests.delete.Rd | 17 -
sdk/R/man/container_requests.get.Rd | 17 -
sdk/R/man/container_requests.list.Rd | 34 -
sdk/R/man/container_requests.update.Rd | 20 -
sdk/R/man/containers.auth.Rd | 17 -
sdk/R/man/containers.create.Rd | 20 -
sdk/R/man/containers.current.Rd | 14 -
sdk/R/man/containers.delete.Rd | 17 -
sdk/R/man/containers.get.Rd | 17 -
sdk/R/man/containers.list.Rd | 34 -
sdk/R/man/containers.lock.Rd | 17 -
sdk/R/man/containers.secret_mounts.Rd | 17 -
sdk/R/man/containers.unlock.Rd | 17 -
sdk/R/man/containers.update.Rd | 20 -
.../assets/images => sdk/R/man/figures}/dax.png | Bin
sdk/R/man/groups.contents.Rd | 38 -
sdk/R/man/groups.create.Rd | 19 -
sdk/R/man/groups.delete.Rd | 17 -
sdk/R/man/groups.get.Rd | 17 -
sdk/R/man/groups.list.Rd | 36 -
sdk/R/man/groups.trash.Rd | 17 -
sdk/R/man/groups.untrash.Rd | 17 -
sdk/R/man/groups.update.Rd | 19 -
sdk/R/man/humans.create.Rd | 19 -
sdk/R/man/humans.delete.Rd | 17 -
sdk/R/man/humans.get.Rd | 17 -
sdk/R/man/humans.list.Rd | 34 -
sdk/R/man/humans.update.Rd | 19 -
sdk/R/man/job_tasks.create.Rd | 19 -
sdk/R/man/job_tasks.delete.Rd | 17 -
sdk/R/man/job_tasks.get.Rd | 17 -
sdk/R/man/job_tasks.list.Rd | 34 -
sdk/R/man/job_tasks.update.Rd | 19 -
sdk/R/man/jobs.cancel.Rd | 17 -
sdk/R/man/jobs.create.Rd | 29 -
sdk/R/man/jobs.delete.Rd | 17 -
sdk/R/man/jobs.get.Rd | 17 -
sdk/R/man/jobs.list.Rd | 33 -
sdk/R/man/jobs.lock.Rd | 17 -
sdk/R/man/jobs.queue.Rd | 34 -
sdk/R/man/jobs.queue_size.Rd | 14 -
sdk/R/man/jobs.update.Rd | 19 -
sdk/R/man/keep_disks.create.Rd | 20 -
sdk/R/man/keep_disks.delete.Rd | 17 -
sdk/R/man/keep_disks.get.Rd | 17 -
sdk/R/man/keep_disks.list.Rd | 34 -
sdk/R/man/keep_disks.ping.Rd | 31 -
sdk/R/man/keep_disks.update.Rd | 20 -
sdk/R/man/keep_services.accessible.Rd | 14 -
sdk/R/man/keep_services.create.Rd | 20 -
sdk/R/man/keep_services.delete.Rd | 17 -
sdk/R/man/keep_services.get.Rd | 17 -
sdk/R/man/keep_services.list.Rd | 34 -
sdk/R/man/keep_services.update.Rd | 20 -
sdk/R/man/links.create.Rd | 19 -
sdk/R/man/links.delete.Rd | 17 -
sdk/R/man/links.get.Rd | 17 -
sdk/R/man/links.get_permissions.Rd | 17 -
sdk/R/man/links.list.Rd | 34 -
sdk/R/man/links.update.Rd | 19 -
sdk/R/man/listAll.Rd | 44 +-
sdk/R/man/logs.create.Rd | 19 -
sdk/R/man/logs.delete.Rd | 17 -
sdk/R/man/logs.get.Rd | 17 -
sdk/R/man/logs.list.Rd | 33 -
sdk/R/man/logs.update.Rd | 19 -
sdk/R/man/nodes.create.Rd | 22 -
sdk/R/man/nodes.delete.Rd | 17 -
sdk/R/man/nodes.get.Rd | 17 -
sdk/R/man/nodes.list.Rd | 34 -
sdk/R/man/nodes.ping.Rd | 19 -
sdk/R/man/nodes.update.Rd | 21 -
sdk/R/man/pipeline_instances.cancel.Rd | 17 -
sdk/R/man/pipeline_instances.create.Rd | 20 -
sdk/R/man/pipeline_instances.delete.Rd | 17 -
sdk/R/man/pipeline_instances.get.Rd | 17 -
sdk/R/man/pipeline_instances.list.Rd | 34 -
sdk/R/man/pipeline_instances.update.Rd | 20 -
sdk/R/man/pipeline_templates.create.Rd | 20 -
sdk/R/man/pipeline_templates.delete.Rd | 17 -
sdk/R/man/pipeline_templates.get.Rd | 17 -
sdk/R/man/pipeline_templates.list.Rd | 34 -
sdk/R/man/pipeline_templates.update.Rd | 20 -
sdk/R/man/print.ArvadosFile.Rd | 32 +-
sdk/R/man/print.Collection.Rd | 32 +-
sdk/R/man/print.Subcollection.Rd | 32 +-
sdk/R/man/projects.create.Rd | 19 -
sdk/R/man/projects.delete.Rd | 17 -
sdk/R/man/projects.get.Rd | 17 -
sdk/R/man/projects.list.Rd | 38 -
sdk/R/man/projects.update.Rd | 19 -
sdk/R/man/repositories.create.Rd | 20 -
sdk/R/man/repositories.delete.Rd | 17 -
sdk/R/man/repositories.get.Rd | 17 -
sdk/R/man/repositories.get_all_permissions.Rd | 14 -
sdk/R/man/repositories.list.Rd | 34 -
sdk/R/man/repositories.update.Rd | 20 -
sdk/R/man/specimens.create.Rd | 20 -
sdk/R/man/specimens.delete.Rd | 17 -
sdk/R/man/specimens.get.Rd | 17 -
sdk/R/man/specimens.list.Rd | 34 -
sdk/R/man/specimens.update.Rd | 20 -
sdk/R/man/traits.create.Rd | 19 -
sdk/R/man/traits.delete.Rd | 17 -
sdk/R/man/traits.get.Rd | 17 -
sdk/R/man/traits.list.Rd | 34 -
sdk/R/man/traits.update.Rd | 19 -
sdk/R/man/user_agreements.create.Rd | 20 -
sdk/R/man/user_agreements.delete.Rd | 17 -
sdk/R/man/user_agreements.get.Rd | 17 -
sdk/R/man/user_agreements.list.Rd | 34 -
sdk/R/man/user_agreements.new.Rd | 14 -
sdk/R/man/user_agreements.sign.Rd | 14 -
sdk/R/man/user_agreements.signatures.Rd | 14 -
sdk/R/man/user_agreements.update.Rd | 20 -
sdk/R/man/users.activate.Rd | 17 -
sdk/R/man/users.create.Rd | 19 -
sdk/R/man/users.current.Rd | 14 -
sdk/R/man/users.delete.Rd | 17 -
sdk/R/man/users.get.Rd | 17 -
sdk/R/man/users.list.Rd | 34 -
sdk/R/man/users.merge.Rd | 22 -
sdk/R/man/users.setup.Rd | 26 -
sdk/R/man/users.system.Rd | 14 -
sdk/R/man/users.unsetup.Rd | 17 -
sdk/R/man/users.update.Rd | 19 -
sdk/R/man/virtual_machines.create.Rd | 20 -
sdk/R/man/virtual_machines.delete.Rd | 17 -
sdk/R/man/virtual_machines.get.Rd | 17 -
sdk/R/man/virtual_machines.get_all_logins.Rd | 14 -
sdk/R/man/virtual_machines.list.Rd | 34 -
sdk/R/man/virtual_machines.logins.Rd | 17 -
sdk/R/man/virtual_machines.update.Rd | 20 -
sdk/R/man/workflows.create.Rd | 20 -
sdk/R/man/workflows.delete.Rd | 17 -
sdk/R/man/workflows.get.Rd | 17 -
sdk/R/man/workflows.list.Rd | 34 -
sdk/R/man/workflows.update.Rd | 20 -
sdk/R/tests/testthat/fakes/FakeRESTService.R | 2 +-
182 files changed, 8161 insertions(+), 8251 deletions(-)
create mode 100644 sdk/R/R/ArvadosR.R
delete mode 100644 sdk/R/README.Rmd
create mode 100644 sdk/R/README.md
create mode 100644 sdk/R/man/ArvadosR.Rd
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delete mode 100644 sdk/R/man/api_client_authorizations.current.Rd
delete mode 100644 sdk/R/man/api_client_authorizations.delete.Rd
delete mode 100644 sdk/R/man/api_client_authorizations.get.Rd
delete mode 100644 sdk/R/man/api_client_authorizations.list.Rd
delete mode 100644 sdk/R/man/api_client_authorizations.update.Rd
delete mode 100644 sdk/R/man/api_clients.create.Rd
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delete mode 100644 sdk/R/man/api_clients.get.Rd
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copy {apps/workbench/app/assets/images => sdk/R/man/figures}/dax.png (100%)
delete mode 100644 sdk/R/man/groups.contents.Rd
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via 9b0de8314d6297df506734844bb2b833ba7d022c (commit)
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via c0be03f2d77ecbdefac173e38509a501245472f7 (commit)
via b08dc77943f424c8089fc07bc7b99caf9c01fbdd (commit)
via 7d2d4dded0198057ad7f90eac90eff802e21cde4 (commit)
via de8cd4c6a56cac85dbcf7fe1fcb29abe98fe9f18 (commit)
from 4dc8c5e74ba2386715a1f31a319077bc34f3b330 (commit)
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commit 9b0de8314d6297df506734844bb2b833ba7d022c
Merge: 4dc8c5e74 5d9edef1f
Author: Peter Amstutz <peter.amstutz at curii.com>
Date: Thu Dec 15 17:09:12 2022 -0500
Merge branch '19704-aneta-r-sdk' refs #19704
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz at curii.com>
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