[ARVADOS] updated: 2.1.0-1510-gf0449aa6f
Git user
git at public.arvados.org
Tue Oct 26 18:29:56 UTC 2021
Summary of changes:
doc/_includes/_singularity_mksquashfs_configuration.liquid | 2 +-
doc/install/crunch2-cloud/install-compute-node.html.textile.liquid | 4 ++--
tools/compute-images/build.sh | 4 ++--
3 files changed, 5 insertions(+), 5 deletions(-)
via f0449aa6f4d490de26e5240202a8e77113d4c471 (commit)
from 067a68b5e9dfa1c7d5e68fd64553e0ced89cad36 (commit)
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commit f0449aa6f4d490de26e5240202a8e77113d4c471
Author: Ward Vandewege <ward at curii.com>
Date: Tue Oct 26 14:28:23 2021 -0400
Since CWL defaults to 256M of ram, make that the suggested amount for
the `mksquashfs mem` setting in singularity.conf.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward at curii.com>
diff --git a/doc/_includes/_singularity_mksquashfs_configuration.liquid b/doc/_includes/_singularity_mksquashfs_configuration.liquid
index dc0c394ba..e31e801c1 100644
--- a/doc/_includes/_singularity_mksquashfs_configuration.liquid
+++ b/doc/_includes/_singularity_mksquashfs_configuration.liquid
@@ -12,4 +12,4 @@ This section is only relevant when using Singularity. Skip this section when usi
{% include 'notebox_end' %}
{% endif %}
-Docker images are converted on the fly by @mksquashfs@, which can consume a considerable amount of RAM. The RAM usage of mksquashfs can be restricted in @/etc/singularity/singularity.conf@ with a line like @mksquashfs mem = 512M at . The amount of memory made available for mksquashfs should be configured lower than the smallest amount of memory requested by a container on the cluster to avoid the conversion being killed for using too much memory.
+Docker images are converted on the fly by @mksquashfs@, which can consume a considerable amount of RAM. The RAM usage of mksquashfs can be restricted in @/etc/singularity/singularity.conf@ with a line like @mksquashfs mem = 256M at . The amount of memory made available for mksquashfs should be configured lower than the smallest amount of memory requested by a container on the cluster to avoid the conversion being killed for using too much memory. The default memory allocation in CWL is 256M, so that is also a good choice for the @mksquashfs mem@ setting.
diff --git a/doc/install/crunch2-cloud/install-compute-node.html.textile.liquid b/doc/install/crunch2-cloud/install-compute-node.html.textile.liquid
index 7c922e28d..a56519fb1 100644
--- a/doc/install/crunch2-cloud/install-compute-node.html.textile.liquid
+++ b/doc/install/crunch2-cloud/install-compute-node.html.textile.liquid
@@ -59,7 +59,7 @@ foktmqOY8MyctzFgXBpGTxPliGjqo8OkrOyQP2g+FL7v+Km31Xs61P8=
{% include 'singularity_mksquashfs_configuration' %}
-The desired amount of memory to make available for @mksquashfs@ can be configured in an argument to the build script, see the next section. It defaults to @512M at .
+The desired amount of memory to make available for @mksquashfs@ can be configured in an argument to the build script, see the next section. It defaults to @256M at .
h2(#building). The build script
@@ -111,7 +111,7 @@ Options:
Set this to "-dev" to track the unstable/dev Arvados repositories
--public-key-file (required)
Path to the public key file that a-d-c will use to log into the compute node
- --mksquashfs-mem (default: 512M)
+ --mksquashfs-mem (default: 256M)
Only relevant when using Singularity. This is the amount of memory mksquashfs is allowed to use.
--debug
Output debug information (default: false)
diff --git a/tools/compute-images/build.sh b/tools/compute-images/build.sh
index a714bafc1..526db4906 100755
--- a/tools/compute-images/build.sh
+++ b/tools/compute-images/build.sh
@@ -55,7 +55,7 @@ Options:
Set this to "-dev" to track the unstable/dev Arvados repositories
--public-key-file (required)
Path to the public key file that a-d-c will use to log into the compute node
- --mksquashfs-mem (default: 512M)
+ --mksquashfs-mem (default: 256M)
Only relevant when using Singularity. This is the amount of memory mksquashfs is allowed to use.
--debug
Output debug information (default: false)
@@ -80,7 +80,7 @@ DEBUG=
SSH_USER=
AWS_DEFAULT_REGION=us-east-1
PUBLIC_KEY_FILE=
-MKSQUASHFS_MEM=512M
+MKSQUASHFS_MEM=256M
PARSEDOPTS=$(getopt --name "$0" --longoptions \
help,json-file:,arvados-cluster-id:,aws-source-ami:,aws-profile:,aws-secrets-file:,aws-region:,aws-vpc-id:,aws-subnet-id:,gcp-project-id:,gcp-account-file:,gcp-zone:,azure-secrets-file:,azure-resource-group:,azure-location:,azure-sku:,azure-cloud-environment:,ssh_user:,resolver:,reposuffix:,public-key-file:,mksquashfs-mem:,debug \
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