[ARVADOS] updated: 2.1.0-1011-gb9c5339d1

Git user git at public.arvados.org
Thu Jul 1 13:24:10 UTC 2021


Summary of changes:
 apps/workbench/Gemfile                             |   3 -
 apps/workbench/Gemfile.lock                        |  97 ++--
 apps/workbench/config/boot.rb                      |   1 -
 apps/workbench/test/integration/logins_test.rb     |   5 +-
 cmd/arvados-client/cmd.go                          |   2 +
 doc/_config.yml                                    |   1 -
 ...restricting-upload-download.html.textile.liquid | 148 +++++
 doc/api/tokens_sso.html.textile.liquid             |  78 ---
 doc/install/salt-multi-host.html.textile.liquid    |  30 +-
 doc/install/salt.html.textile.liquid               | 106 +++-
 .../topics/storage-classes.html.textile.liquid     |  14 +-
 go.mod                                             |   4 +-
 go.sum                                             |   5 +
 lib/cloud/ec2/ec2.go                               |  28 +
 lib/cloud/ec2/ec2_test.go                          |  14 +-
 lib/cmd/cmd.go                                     |   8 +
 lib/config/config.default.yml                      | 100 ++--
 lib/config/deprecated.go                           |  12 -
 lib/config/export.go                               |   7 +-
 lib/config/generated_config.go                     | 100 ++--
 lib/config/load.go                                 |  32 +-
 lib/config/load_test.go                            |  32 +-
 lib/controller/handler_test.go                     |  28 -
 lib/controller/localdb/login.go                    |  21 +-
 lib/controller/localdb/login_oidc_test.go          |   2 +-
 lib/controller/rpc/conn_test.go                    |   7 +-
 lib/costanalyzer/cmd.go                            |  13 +-
 lib/costanalyzer/costanalyzer.go                   |  46 +-
 lib/deduplicationreport/command.go                 |  10 +-
 lib/diagnostics/cmd.go                             | 612 +++++++++++++++++++++
 sdk/cwl/arvados_cwl/arvtool.py                     |  11 +-
 sdk/cwl/arvados_cwl/fsaccess.py                    |   2 +-
 ...ling-slash-dir.cwl => 17801-runtime-outdir.cwl} |   2 +-
 sdk/cwl/tests/arvados-tests.yml                    |  34 ++
 sdk/cwl/tests/test_submit.py                       |  15 +
 sdk/go/arvados/config.go                           |  20 +-
 sdk/go/arvados/fs_base.go                          |  19 +
 sdk/go/arvados/fs_collection.go                    |  12 +-
 sdk/go/arvados/fs_site.go                          |   6 +
 sdk/go/arvados/fs_site_test.go                     |   9 +
 sdk/go/arvadostest/fixtures.go                     |   3 +
 sdk/python/arvados/commands/put.py                 |  34 +-
 sdk/python/tests/run_test_server.py                |  13 +-
 sdk/python/tests/test_arv_put.py                   |  31 +-
 services/api/Gemfile                               |   7 -
 services/api/Gemfile.lock                          | 113 ++--
 .../api/app/assets/stylesheets/application.css     |   2 +-
 .../api/app/controllers/application_controller.rb  |   2 +-
 .../app/controllers/user_sessions_controller.rb    |  24 +-
 services/api/app/models/container_request.rb       |  14 +
 .../api/app/views/layouts/application.html.erb     |   3 -
 services/api/app/views/static/intro.html.erb       |  17 +-
 .../api/app/views/static/login_failure.html.erb    |   2 +-
 .../api/app/views/user_sessions/failure.html.erb   |   2 +-
 services/api/config/arvados_config.rb              |  19 -
 services/api/config/boot.rb                        |   1 -
 services/api/config/environment.rb                 |   1 -
 services/api/config/initializers/omniauth_init.rb  |  23 -
 services/api/lib/josh_id.rb                        |  58 --
 services/api/test/fixtures/container_requests.yml  |  30 +-
 services/api/test/fixtures/containers.yml          |  24 +-
 .../functional/user_sessions_controller_test.rb    |  10 +-
 .../api/test/integration/login_workflow_test.rb    |   2 +-
 .../api/test/integration/user_sessions_test.rb     |  16 +-
 services/api/test/test_helper.rb                   |   1 -
 services/api/test/unit/container_request_test.rb   |  25 +
 services/fuse/arvados_fuse/__init__.py             |   8 -
 services/fuse/arvados_fuse/command.py              |  19 +-
 services/fuse/arvados_fuse/fusedir.py              |  39 +-
 services/fuse/tests/test_mount.py                  |  29 +
 services/fuse/tests/test_tmp_collection.py         |  10 +
 services/keep-web/cache.go                         |  69 ++-
 services/keep-web/handler.go                       | 142 ++++-
 services/keep-web/handler_test.go                  | 194 ++++++-
 services/keep-web/s3.go                            |  62 ++-
 services/keep-web/s3_test.go                       |  22 +-
 services/keep-web/server_test.go                   |   4 +-
 services/keepproxy/keepproxy.go                    | 191 +++++--
 services/keepproxy/keepproxy_test.go               | 187 ++++++-
 .../local.params.example.multiple_hosts            |   5 +-
 ...l.params.example.single_host_multiple_hostnames |   5 +-
 ...ocal.params.example.single_host_single_hostname |   5 +-
 tools/salt-install/provision.sh                    | 142 +++--
 tools/user-activity/arvados_user_activity/main.py  |  20 +
 84 files changed, 2485 insertions(+), 841 deletions(-)
 create mode 100644 doc/admin/restricting-upload-download.html.textile.liquid
 delete mode 100644 doc/api/tokens_sso.html.textile.liquid
 create mode 100644 lib/diagnostics/cmd.go
 copy sdk/cwl/tests/{10380-trailing-slash-dir.cwl => 17801-runtime-outdir.cwl} (92%)
 delete mode 100644 services/api/config/initializers/omniauth_init.rb
 delete mode 100644 services/api/lib/josh_id.rb

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commit b9c5339d113c63ffc3d8a7c6bf1019616bb3f89a
Merge: 5b554bbe0 c89213f5a
Author: Ward Vandewege <ward at curii.com>
Date:   Thu Jul 1 09:23:45 2021 -0400

    17778: Merge branch 'master' into 17778-doc-update
    
    Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward at curii.com>


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