[ARVADOS] created: 2.1.0-278-g7c99875ef
Git user
git at public.arvados.org
Fri Jan 22 19:26:53 UTC 2021
at 7c99875efea3ec5415427063cf79ddc44c58f55f (commit)
commit 7c99875efea3ec5415427063cf79ddc44c58f55f
Author: Peter Amstutz <peter.amstutz at curii.com>
Date: Fri Jan 22 14:26:09 2021 -0500
17286: Log clickable URL to container request in workbench
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz at curii.com>
diff --git a/sdk/cwl/arvados_cwl/arvcontainer.py b/sdk/cwl/arvados_cwl/arvcontainer.py
index 7b81bfb44..72ef14f67 100644
--- a/sdk/cwl/arvados_cwl/arvcontainer.py
+++ b/sdk/cwl/arvados_cwl/arvcontainer.py
@@ -547,6 +547,17 @@ class RunnerContainer(Runner):
logger.info("%s submitted container_request %s", self.arvrunner.label(self), response["uuid"])
+ workbench1 = self.arvrunner.api.config()["Services"]["Workbench1"]["ExternalURL"]
+ workbench2 = self.arvrunner.api.config()["Services"]["Workbench2"]["ExternalURL"]
+ url = ""
+ if workbench2:
+ url = "{}processes/{}".format(workbench2, response["uuid"])
+ elif workbench1:
+ url = "{}container_requests/{}".format(workbench1, response["uuid"])
+ if url:
+ logger.info("Monitor workflow progress at %s", url)
+
+
def done(self, record):
try:
container = self.arvrunner.api.containers().get(
diff --git a/sdk/cwl/arvados_cwl/executor.py b/sdk/cwl/arvados_cwl/executor.py
index 947b630ba..0a2e9c569 100644
--- a/sdk/cwl/arvados_cwl/executor.py
+++ b/sdk/cwl/arvados_cwl/executor.py
@@ -524,7 +524,9 @@ The 'jobs' API is no longer supported.
def arv_executor(self, updated_tool, job_order, runtimeContext, logger=None):
self.debug = runtimeContext.debug
- logger.info("Using cluster %s (%s)", self.api.config()["ClusterID"], self.api.config()["Services"]["Controller"]["ExternalURL"])
+ workbench1 = self.api.config()["Services"]["Workbench1"]["ExternalURL"]
+ workbench2 = self.api.config()["Services"]["Workbench2"]["ExternalURL"]
+ logger.info("Using cluster %s (%s)", self.api.config()["ClusterID"], workbench2 or workbench1)
updated_tool.visit(self.check_features)
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