[ARVADOS] updated: 1.3.0-2729-g7ff8f285e
Git user
git at public.arvados.org
Fri Jun 26 13:54:21 UTC 2020
Summary of changes:
apps/workbench/Gemfile.lock | 2 +-
apps/workbench/test/integration/projects_test.rb | 2 +-
build/run-build-packages-python-and-ruby.sh | 110 ++++++++++++------
doc/admin/upgrading.html.textile.liquid | 37 +++++-
doc/api/permission-model.html.textile.liquid | 94 ++++++++++-----
doc/index.html.liquid | 3 +-
.../install-shell-server.html.textile.liquid | 2 +-
.../getting_started/community.html.textile.liquid | 12 +-
doc/user/reference/api-tokens.html.textile.liquid | 2 +-
docker/jobs/Dockerfile | 4 +-
docker/jobs/apt.arvados.org-dev.list | 2 +-
docker/jobs/apt.arvados.org-stable.list | 2 +-
docker/jobs/apt.arvados.org-testing.list | 2 +-
lib/config/config.default.yml | 7 ++
lib/config/export.go | 1 +
lib/config/generated_config.go | 7 ++
lib/controller/federation_test.go | 1 +
lib/controller/handler_test.go | 1 +
lib/controller/proxy.go | 4 +-
lib/recovercollection/cmd.go | 8 +-
sdk/cwl/arvados_cwl/__init__.py | 6 +-
sdk/cwl/arvados_cwl/executor.py | 2 +-
sdk/cwl/setup.py | 4 +-
sdk/go/arvados/client.go | 70 ++++++++----
sdk/go/arvados/config.go | 1 +
sdk/go/arvados/keep_service.go | 14 +--
sdk/go/arvados/keep_service_test.go | 3 +-
services/api/Gemfile.lock | 2 +-
services/api/app/models/arvados_model.rb | 5 +-
services/api/app/models/group.rb | 41 +++++++
services/api/app/models/link.rb | 40 ++++++-
.../migrate/20200602141328_fix_roles_projects.rb | 17 +++
services/api/db/structure.sql | 3 +-
services/api/lib/current_api_client.rb | 17 ++-
services/api/lib/fix_roles_projects.rb | 75 ++++++++++++
services/api/lib/update_permissions.rb | 15 ++-
services/api/test/fixtures/collections.yml | 3 +-
services/api/test/fixtures/groups.yml | 35 +++---
services/api/test/fixtures/links.yml | 18 ++-
.../test/functional/application_controller_test.rb | 5 +-
.../api/test/functional/arvados/v1/filters_test.rb | 10 +-
.../arvados/v1/groups_controller_test.rb | 27 +++--
.../arvados/v1/repositories_controller_test.rb | 4 +-
.../functional/arvados/v1/users_controller_test.rb | 4 +-
services/api/test/integration/groups_test.rb | 3 +-
services/api/test/integration/permissions_test.rb | 15 ++-
services/api/test/performance/permission_test.rb | 2 +-
services/api/test/unit/arvados_model_test.rb | 6 +-
services/api/test/unit/group_test.rb | 127 +++++++++++++++++----
services/api/test/unit/owner_test.rb | 32 +++++-
services/api/test/unit/permission_test.rb | 39 ++++---
services/fuse/tests/test_mount.py | 2 +-
services/keep-balance/balance.go | 45 +++++---
services/keep-balance/collection.go | 5 +-
services/keep-balance/collection_test.go | 3 +-
services/keep-balance/keep_service.go | 13 ++-
tools/keep-exercise/keep-exercise.go | 97 ++++++++++++----
tools/sync-groups/sync-groups.go | 15 ++-
tools/sync-groups/sync-groups_test.go | 2 +-
59 files changed, 845 insertions(+), 285 deletions(-)
create mode 100644 services/api/db/migrate/20200602141328_fix_roles_projects.rb
create mode 100644 services/api/lib/fix_roles_projects.rb
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commit 7ff8f285eb1ff374091e2d8e8e23f36d8b15a775
Merge: 3e9830b79 ded127155
Author: Ward Vandewege <ward at curii.com>
Date: Fri Jun 26 09:54:00 2020 -0400
16522: Merge branch 'master' into 16522-python3-arvados-fuse
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward at curii.com>
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