[ARVADOS] updated: 1.3.0-2729-g7ff8f285e

Git user git at public.arvados.org
Fri Jun 26 13:54:21 UTC 2020


Summary of changes:
 apps/workbench/Gemfile.lock                        |   2 +-
 apps/workbench/test/integration/projects_test.rb   |   2 +-
 build/run-build-packages-python-and-ruby.sh        | 110 ++++++++++++------
 doc/admin/upgrading.html.textile.liquid            |  37 +++++-
 doc/api/permission-model.html.textile.liquid       |  94 ++++++++++-----
 doc/index.html.liquid                              |   3 +-
 .../install-shell-server.html.textile.liquid       |   2 +-
 .../getting_started/community.html.textile.liquid  |  12 +-
 doc/user/reference/api-tokens.html.textile.liquid  |   2 +-
 docker/jobs/Dockerfile                             |   4 +-
 docker/jobs/apt.arvados.org-dev.list               |   2 +-
 docker/jobs/apt.arvados.org-stable.list            |   2 +-
 docker/jobs/apt.arvados.org-testing.list           |   2 +-
 lib/config/config.default.yml                      |   7 ++
 lib/config/export.go                               |   1 +
 lib/config/generated_config.go                     |   7 ++
 lib/controller/federation_test.go                  |   1 +
 lib/controller/handler_test.go                     |   1 +
 lib/controller/proxy.go                            |   4 +-
 lib/recovercollection/cmd.go                       |   8 +-
 sdk/cwl/arvados_cwl/__init__.py                    |   6 +-
 sdk/cwl/arvados_cwl/executor.py                    |   2 +-
 sdk/cwl/setup.py                                   |   4 +-
 sdk/go/arvados/client.go                           |  70 ++++++++----
 sdk/go/arvados/config.go                           |   1 +
 sdk/go/arvados/keep_service.go                     |  14 +--
 sdk/go/arvados/keep_service_test.go                |   3 +-
 services/api/Gemfile.lock                          |   2 +-
 services/api/app/models/arvados_model.rb           |   5 +-
 services/api/app/models/group.rb                   |  41 +++++++
 services/api/app/models/link.rb                    |  40 ++++++-
 .../migrate/20200602141328_fix_roles_projects.rb   |  17 +++
 services/api/db/structure.sql                      |   3 +-
 services/api/lib/current_api_client.rb             |  17 ++-
 services/api/lib/fix_roles_projects.rb             |  75 ++++++++++++
 services/api/lib/update_permissions.rb             |  15 ++-
 services/api/test/fixtures/collections.yml         |   3 +-
 services/api/test/fixtures/groups.yml              |  35 +++---
 services/api/test/fixtures/links.yml               |  18 ++-
 .../test/functional/application_controller_test.rb |   5 +-
 .../api/test/functional/arvados/v1/filters_test.rb |  10 +-
 .../arvados/v1/groups_controller_test.rb           |  27 +++--
 .../arvados/v1/repositories_controller_test.rb     |   4 +-
 .../functional/arvados/v1/users_controller_test.rb |   4 +-
 services/api/test/integration/groups_test.rb       |   3 +-
 services/api/test/integration/permissions_test.rb  |  15 ++-
 services/api/test/performance/permission_test.rb   |   2 +-
 services/api/test/unit/arvados_model_test.rb       |   6 +-
 services/api/test/unit/group_test.rb               | 127 +++++++++++++++++----
 services/api/test/unit/owner_test.rb               |  32 +++++-
 services/api/test/unit/permission_test.rb          |  39 ++++---
 services/fuse/tests/test_mount.py                  |   2 +-
 services/keep-balance/balance.go                   |  45 +++++---
 services/keep-balance/collection.go                |   5 +-
 services/keep-balance/collection_test.go           |   3 +-
 services/keep-balance/keep_service.go              |  13 ++-
 tools/keep-exercise/keep-exercise.go               |  97 ++++++++++++----
 tools/sync-groups/sync-groups.go                   |  15 ++-
 tools/sync-groups/sync-groups_test.go              |   2 +-
 59 files changed, 845 insertions(+), 285 deletions(-)
 create mode 100644 services/api/db/migrate/20200602141328_fix_roles_projects.rb
 create mode 100644 services/api/lib/fix_roles_projects.rb

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Those revisions listed above that are new to this repository have
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commit 7ff8f285eb1ff374091e2d8e8e23f36d8b15a775
Merge: 3e9830b79 ded127155
Author: Ward Vandewege <ward at curii.com>
Date:   Fri Jun 26 09:54:00 2020 -0400

    16522: Merge branch 'master' into 16522-python3-arvados-fuse
    
    Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward at curii.com>


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