[ARVADOS] updated: 1.3.0-2679-g6989ee05e

[Git user]

Summary of changes:
 .../api/app/controllers/database_controller.rb     |   5 +-
 services/api/app/models/arvados_model.rb           |  48 ++-
 services/api/app/models/database_seeds.rb          |   4 +
 services/api/app/models/group.rb                   |  68 +++-
 services/api/app/models/link.rb                    |  38 +-
 .../api/app/models/materialized_permission.rb      |   2 +-
 .../trashed_group.rb}                              |   2 +-
 services/api/app/models/user.rb                    | 148 +++++---
 .../db/migrate/20200501150153_permission_table.rb  | 362 ++++++++++++++++++
 services/api/db/structure.sql                      | 414 +++++++++++++++------
 .../20200501150153_permission_table_constants.rb   |  85 +++++
 services/api/lib/refresh_permission_view.rb        |  40 --
 services/api/lib/update_permissions.rb             | 205 ++++++++++
 services/api/test/fixtures/groups.yml              |   4 +-
 services/api/test/fixtures/users.yml               |  14 +
 .../arvados/v1/groups_controller_test.rb           |  14 +-
 services/api/test/integration/groups_test.rb       |  10 +-
 services/api/test/performance/permission_test.rb   |   2 +-
 services/api/test/test_helper.rb                   |   5 +-
 services/api/test/unit/collection_test.rb          |  13 +
 services/api/test/unit/owner_test.rb               |  27 +-
 services/api/test/unit/permission_test.rb          | 232 ++++++++++--
 services/api/test/unit/user_test.rb                |  13 +-
 23 files changed, 1456 insertions(+), 299 deletions(-)
 copy apps/workbench/app/controllers/traits_controller.rb => services/api/app/models/materialized_permission.rb (67%)
 copy services/api/app/{helpers/api_client_authorizations_helper.rb => models/trashed_group.rb} (72%)
 create mode 100644 services/api/db/migrate/20200501150153_permission_table.rb
 create mode 100644 services/api/lib/20200501150153_permission_table_constants.rb
 delete mode 100644 services/api/lib/refresh_permission_view.rb
 create mode 100644 services/api/lib/update_permissions.rb

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commit 6989ee05ed075f597e9e1050b658e36c1da0a7d6
Merge: 2cae80e77 98ec1f009
Author: Peter Amstutz <peter.amstutz at curii.com>
Date:   Tue Jun 16 17:25:38 2020 -0400

    Merge branch '16007-permission-table-rb' refs #16007
    
    Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz at curii.com>


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