[ARVADOS] updated: 1.3.0-1090-gb4b8e120c

Git user git at public.curoverse.com
Thu Jun 13 17:22:47 UTC 2019


Summary of changes:
 .../app/controllers/application_controller.rb      |  17 +--
 .../app/controllers/projects_controller.rb         |   1 -
 apps/workbench/app/helpers/application_helper.rb   |   8 +-
 .../app/helpers/arvados_api_client_helper.rb       |   2 +-
 apps/workbench/app/helpers/collections_helper.rb   |   2 +-
 .../app/helpers/pipeline_instances_helper.rb       |   2 +-
 apps/workbench/app/helpers/provenance_helper.rb    |   8 +-
 apps/workbench/app/models/arvados_base.rb          |   8 +-
 apps/workbench/app/models/arvados_resource_list.rb |  15 ++-
 apps/workbench/app/models/collection.rb            |   8 --
 apps/workbench/app/models/container_work_unit.rb   |   1 +
 .../app/views/application/_breadcrumbs.html.erb    |   2 +-
 .../app/views/layouts/application.html.erb         |   2 +-
 .../app/views/projects/_show_dashboard.html.erb    |   3 -
 apps/workbench/config/initializers/inflections.rb  |   8 +-
 apps/workbench/config/load_config.rb               |   2 +-
 apps/workbench/test/integration_helper.rb          |   4 +-
 apps/workbench/test/test_helper.rb                 |   2 +-
 build/package-build-dockerfiles/centos7/Dockerfile |   5 +-
 build/package-build-dockerfiles/debian8/Dockerfile |   5 +-
 build/package-build-dockerfiles/debian9/Dockerfile |   5 +-
 .../ubuntu1604/Dockerfile                          |   5 +-
 .../ubuntu1804/Dockerfile                          |   5 +-
 build/package-test-dockerfiles/debian8/Dockerfile  |   4 +-
 build/package-test-dockerfiles/debian9/Dockerfile  |   4 +-
 .../package-test-dockerfiles/ubuntu1604/Dockerfile |   4 +-
 .../package-test-dockerfiles/ubuntu1804/Dockerfile |   4 +-
 build/run-tests.sh                                 |   2 +-
 doc/_config.yml                                    |   2 +
 doc/_includes/_install_ruby_and_bundler.liquid     |  10 +-
 ...liquid => _install_ruby_and_bundler_sso.liquid} |   2 +-
 doc/_includes/_navbar_top.liquid                   |  11 +-
 doc/install/install-sso.html.textile.liquid        |   2 +-
 doc/sdk/python/cookbook.html.textile.liquid        |  51 +++++++--
 doc/user/index.html.textile.liquid                 |   2 +-
 lib/config/cmd.go                                  |  43 ++++++-
 lib/config/cmd_test.go                             |  14 +--
 lib/config/load.go                                 |   8 ++
 sdk/cwl/arvados_cwl/runner.py                      |   2 +-
 sdk/cwl/setup.py                                   |   2 +-
 sdk/cwl/tests/secondary/wf.cwl                     |   2 +
 sdk/cwl/tests/test_container.py                    |   6 +
 sdk/cwl/tests/test_job.py                          |   7 ++
 sdk/cwl/tests/test_submit.py                       |   5 +
 sdk/cwl/tests/wf-defaults/wf6.cwl                  |   5 +-
 sdk/cwl/tests/wf-defaults/wf7.cwl                  |   5 +-
 sdk/cwl/tests/wf/runin-reqs-wf.cwl                 |   3 +
 sdk/cwl/tests/wf/runin-reqs-wf2.cwl                |   3 +
 sdk/cwl/tests/wf/runin-reqs-wf4.cwl                |   3 +
 sdk/cwl/tests/wf/runin-wf.cwl                      |   4 +-
 sdk/cwl/tests/wf/runin-with-ttl-wf.cwl             |   4 +-
 sdk/go/keepclient/keepclient_test.go               |   4 +-
 sdk/python/arvados/commands/put.py                 | 115 +++++++++++++++++--
 sdk/python/tests/test_arv_put.py                   | 126 +++++++++++++++++++--
 services/api/Gemfile.lock                          |   2 +-
 .../api/app/controllers/application_controller.rb  |   2 +-
 services/api/app/models/commit.rb                  |   2 +-
 services/login-sync/.gitignore                     |   1 -
 services/login-sync/Gemfile.lock                   |  87 ++++++++++++++
 59 files changed, 535 insertions(+), 138 deletions(-)
 copy doc/_includes/{_install_ruby_and_bundler.liquid => _install_ruby_and_bundler_sso.liquid} (93%)
 create mode 100644 services/login-sync/Gemfile.lock

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      from  f76da4abdfc8fd1d02df0782197fbf85dc580368 (commit)

Those revisions listed above that are new to this repository have
not appeared on any other notification email; so we list those
revisions in full, below.


commit b4b8e120c8ac43a16513079e2ae9f46bcdb9c35d
Merge: f76da4abd 21dfd2339
Author: Eric Biagiotti <ebiagiotti at veritasgenetics.com>
Date:   Thu Jun 13 13:22:37 2019 -0400

    Merge remote-tracking branch 'origin/master' into 15106-trgm-text-search
    
    refs #15106
    
    Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti at veritasgenetics.com>


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