[ARVADOS] updated: 1.3.0-811-gcf1dcfb87
Git user
git at public.curoverse.com
Tue Apr 23 17:49:38 UTC 2019
Summary of changes:
.gitignore | 1 +
.licenseignore | 2 +
build/run-tests.sh | 6 +
doc/Rakefile | 19 +-
doc/_config.yml | 6 +-
doc/sdk/index.html.textile.liquid | 3 +-
doc/sdk/java-v2/example.html.textile.liquid | 49 ++
doc/sdk/java-v2/index.html.textile.liquid | 146 ++++
doc/sdk/java-v2/javadoc.html.textile.liquid | 15 +
doc/sdk/java/index.html.textile.liquid | 4 +-
sdk/java-v2/.gitignore | 9 +
sdk/java-v2/.licenseignore | 4 +
sdk/java-v2/COPYING | 15 +
sdk/java-v2/README.md | 115 +++
agpl-3.0.txt => sdk/java-v2/agpl-3.0.txt | 0
apache-2.0.txt => sdk/java-v2/apache-2.0.txt | 0
sdk/java-v2/build.gradle | 113 +++
sdk/java-v2/settings.gradle | 1 +
.../arvados/client/api/client/BaseApiClient.java | 83 ++
.../client/api/client/BaseStandardApiClient.java | 153 ++++
.../client/api/client/CollectionsApiClient.java | 45 ++
.../client/api/client/CountingFileRequestBody.java | 84 ++
.../arvados/client/api/client/GroupsApiClient.java | 61 ++
.../client/api/client/KeepServerApiClient.java | 54 ++
.../client/api/client/KeepServicesApiClient.java | 43 +
.../client/api/client/KeepWebApiClient.java | 37 +
.../client/api/client/ProgressListener.java | 14 +
.../arvados/client/api/client/UsersApiClient.java | 51 ++
.../api/client/factory/OkHttpClientFactory.java | 89 +++
.../org/arvados/client/api/model/ApiError.java | 42 +
.../org/arvados/client/api/model/Collection.java | 137 ++++
.../arvados/client/api/model/CollectionList.java | 32 +
.../java/org/arvados/client/api/model/Group.java | 319 ++++++++
.../org/arvados/client/api/model/GroupList.java | 32 +
.../java/org/arvados/client/api/model/Item.java | 123 +++
.../org/arvados/client/api/model/ItemList.java | 80 ++
.../org/arvados/client/api/model/KeepService.java | 77 ++
.../arvados/client/api/model/KeepServiceList.java | 32 +
.../client/api/model/RuntimeConstraints.java | 60 ++
.../java/org/arvados/client/api/model/User.java | 147 ++++
.../org/arvados/client/api/model/UserList.java | 32 +
.../client/api/model/argument/Argument.java | 24 +
.../client/api/model/argument/ContentsGroup.java | 63 ++
.../arvados/client/api/model/argument/Filter.java | 118 +++
.../client/api/model/argument/ListArgument.java | 123 +++
.../client/api/model/argument/UntrashGroup.java | 28 +
.../java/org/arvados/client/common/Characters.java | 21 +
.../java/org/arvados/client/common/Headers.java | 15 +
.../java/org/arvados/client/common/Patterns.java | 19 +
.../org/arvados/client/config/ConfigProvider.java | 40 +
.../client/config/ExternalConfigProvider.java | 181 +++++
.../arvados/client/config/FileConfigProvider.java | 107 +++
.../client/exception/ArvadosApiException.java | 25 +
.../client/exception/ArvadosClientException.java | 27 +
.../org/arvados/client/facade/ArvadosFacade.java | 307 ++++++++
.../client/logic/collection/CollectionFactory.java | 134 ++++
.../arvados/client/logic/collection/FileToken.java | 60 ++
.../client/logic/collection/ManifestDecoder.java | 74 ++
.../client/logic/collection/ManifestFactory.java | 67 ++
.../client/logic/collection/ManifestStream.java | 45 ++
.../arvados/client/logic/keep/FileDownloader.java | 256 ++++++
.../client/logic/keep/FileTransferHandler.java | 55 ++
.../arvados/client/logic/keep/FileUploader.java | 101 +++
.../org/arvados/client/logic/keep/KeepClient.java | 244 ++++++
.../org/arvados/client/logic/keep/KeepLocator.java | 86 ++
.../DownloadFolderAlreadyExistsException.java | 24 +
.../keep/exception/FileAlreadyExistsException.java | 23 +
.../java/org/arvados/client/utils/FileMerge.java | 26 +
.../java/org/arvados/client/utils/FileSplit.java | 44 ++
sdk/java-v2/src/main/resources/reference.conf | 23 +
.../api/client/BaseStandardApiClientTest.java | 50 ++
.../api/client/CollectionsApiClientTest.java | 112 +++
.../client/api/client/GroupsApiClientTest.java | 95 +++
.../client/api/client/KeepServerApiClientTest.java | 70 ++
.../api/client/KeepServicesApiClientTest.java | 78 ++
.../client/api/client/UsersApiClientTest.java | 126 +++
.../client/factory/OkHttpClientFactoryTest.java | 96 +++
.../facade/ArvadosFacadeIntegrationTest.java | 258 ++++++
.../arvados/client/facade/ArvadosFacadeTest.java | 200 +++++
.../client/junit/categories/IntegrationTests.java | 10 +
.../client/logic/collection/FileTokenTest.java | 42 +
.../logic/collection/ManifestDecoderTest.java | 108 +++
.../logic/collection/ManifestFactoryTest.java | 40 +
.../logic/collection/ManifestStreamTest.java | 27 +
.../client/logic/keep/FileDownloaderTest.java | 145 ++++
.../arvados/client/logic/keep/KeepClientTest.java | 118 +++
.../arvados/client/logic/keep/KeepLocatorTest.java | 57 ++
.../client/test/utils/ApiClientTestUtils.java | 45 ++
.../test/utils/ArvadosClientIntegrationTest.java | 28 +
.../utils/ArvadosClientMockedWebServerTest.java | 27 +
.../client/test/utils/ArvadosClientUnitTest.java | 24 +
.../arvados/client/test/utils/FileTestUtils.java | 50 ++
.../arvados/client/test/utils/RequestMethod.java | 13 +
.../org/arvados/client/utils/FileMergeTest.java | 48 ++
.../org/arvados/client/utils/FileSplitTest.java | 48 ++
sdk/java-v2/src/test/resources/application.conf | 10 +
.../resources/integration-tests-application.conf | 23 +
.../integration-tests-application.conf.example | 16 +
.../org.mockito.plugins.MockMaker | 1 +
.../api/client/collections-create-manifest.json | 22 +
.../api/client/collections-create-simple.json | 22 +
.../api/client/collections-download-file.json | 22 +
.../arvados/client/api/client/collections-get.json | 22 +
.../client/api/client/collections-list.json | 871 +++++++++++++++++++++
.../org/arvados/client/api/client/groups-get.json | 21 +
.../org/arvados/client/api/client/groups-list.json | 430 ++++++++++
.../client/api/client/keep-client-test-file.txt | 1 +
.../client/keep-services-accessible-disk-only.json | 42 +
.../api/client/keep-services-accessible.json | 42 +
.../client/api/client/keep-services-get.json | 16 +
.../client/api/client/keep-services-list.json | 58 ++
.../api/client/keep-services-not-accessible.json | 9 +
.../arvados/client/api/client/users-create.json | 26 +
.../org/arvados/client/api/client/users-get.json | 26 +
.../org/arvados/client/api/client/users-list.json | 115 +++
.../arvados/client/api/client/users-system.json | 24 +
.../src/test/resources/selfsigned.keystore.jks | Bin 0 -> 2247 bytes
sdk/java-v2/test-in-docker.sh | 48 ++
118 files changed, 8472 insertions(+), 5 deletions(-)
create mode 100644 doc/sdk/java-v2/example.html.textile.liquid
create mode 100644 doc/sdk/java-v2/index.html.textile.liquid
create mode 100644 doc/sdk/java-v2/javadoc.html.textile.liquid
create mode 100644 sdk/java-v2/.gitignore
create mode 100644 sdk/java-v2/.licenseignore
create mode 100644 sdk/java-v2/COPYING
create mode 100644 sdk/java-v2/README.md
copy agpl-3.0.txt => sdk/java-v2/agpl-3.0.txt (100%)
copy apache-2.0.txt => sdk/java-v2/apache-2.0.txt (100%)
create mode 100644 sdk/java-v2/build.gradle
create mode 100644 sdk/java-v2/settings.gradle
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/api/client/BaseApiClient.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/api/client/BaseStandardApiClient.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/api/client/CollectionsApiClient.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/api/client/CountingFileRequestBody.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/api/client/GroupsApiClient.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/api/client/KeepServerApiClient.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/api/client/KeepServicesApiClient.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/api/client/KeepWebApiClient.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/api/client/ProgressListener.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/api/client/UsersApiClient.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/api/client/factory/OkHttpClientFactory.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/api/model/ApiError.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/api/model/Collection.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/api/model/CollectionList.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/api/model/Group.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/api/model/GroupList.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/api/model/Item.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/api/model/ItemList.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/api/model/KeepService.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/api/model/KeepServiceList.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/api/model/RuntimeConstraints.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/api/model/User.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/api/model/UserList.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/api/model/argument/Argument.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/api/model/argument/ContentsGroup.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/api/model/argument/Filter.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/api/model/argument/ListArgument.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/api/model/argument/UntrashGroup.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/common/Characters.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/common/Headers.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/common/Patterns.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/config/ConfigProvider.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/config/ExternalConfigProvider.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/config/FileConfigProvider.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/exception/ArvadosApiException.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/exception/ArvadosClientException.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/facade/ArvadosFacade.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/logic/collection/CollectionFactory.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/logic/collection/FileToken.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/logic/collection/ManifestDecoder.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/logic/collection/ManifestFactory.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/logic/collection/ManifestStream.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/logic/keep/FileDownloader.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/logic/keep/FileTransferHandler.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/logic/keep/FileUploader.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/logic/keep/KeepClient.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/logic/keep/KeepLocator.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/logic/keep/exception/DownloadFolderAlreadyExistsException.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/logic/keep/exception/FileAlreadyExistsException.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/utils/FileMerge.java
create mode 100644 sdk/java-v2/src/main/java/org/arvados/client/utils/FileSplit.java
create mode 100644 sdk/java-v2/src/main/resources/reference.conf
create mode 100644 sdk/java-v2/src/test/java/org/arvados/client/api/client/BaseStandardApiClientTest.java
create mode 100644 sdk/java-v2/src/test/java/org/arvados/client/api/client/CollectionsApiClientTest.java
create mode 100644 sdk/java-v2/src/test/java/org/arvados/client/api/client/GroupsApiClientTest.java
create mode 100644 sdk/java-v2/src/test/java/org/arvados/client/api/client/KeepServerApiClientTest.java
create mode 100644 sdk/java-v2/src/test/java/org/arvados/client/api/client/KeepServicesApiClientTest.java
create mode 100644 sdk/java-v2/src/test/java/org/arvados/client/api/client/UsersApiClientTest.java
create mode 100644 sdk/java-v2/src/test/java/org/arvados/client/api/client/factory/OkHttpClientFactoryTest.java
create mode 100644 sdk/java-v2/src/test/java/org/arvados/client/facade/ArvadosFacadeIntegrationTest.java
create mode 100644 sdk/java-v2/src/test/java/org/arvados/client/facade/ArvadosFacadeTest.java
create mode 100644 sdk/java-v2/src/test/java/org/arvados/client/junit/categories/IntegrationTests.java
create mode 100644 sdk/java-v2/src/test/java/org/arvados/client/logic/collection/FileTokenTest.java
create mode 100644 sdk/java-v2/src/test/java/org/arvados/client/logic/collection/ManifestDecoderTest.java
create mode 100644 sdk/java-v2/src/test/java/org/arvados/client/logic/collection/ManifestFactoryTest.java
create mode 100644 sdk/java-v2/src/test/java/org/arvados/client/logic/collection/ManifestStreamTest.java
create mode 100644 sdk/java-v2/src/test/java/org/arvados/client/logic/keep/FileDownloaderTest.java
create mode 100644 sdk/java-v2/src/test/java/org/arvados/client/logic/keep/KeepClientTest.java
create mode 100644 sdk/java-v2/src/test/java/org/arvados/client/logic/keep/KeepLocatorTest.java
create mode 100644 sdk/java-v2/src/test/java/org/arvados/client/test/utils/ApiClientTestUtils.java
create mode 100644 sdk/java-v2/src/test/java/org/arvados/client/test/utils/ArvadosClientIntegrationTest.java
create mode 100644 sdk/java-v2/src/test/java/org/arvados/client/test/utils/ArvadosClientMockedWebServerTest.java
create mode 100644 sdk/java-v2/src/test/java/org/arvados/client/test/utils/ArvadosClientUnitTest.java
create mode 100644 sdk/java-v2/src/test/java/org/arvados/client/test/utils/FileTestUtils.java
create mode 100644 sdk/java-v2/src/test/java/org/arvados/client/test/utils/RequestMethod.java
create mode 100644 sdk/java-v2/src/test/java/org/arvados/client/utils/FileMergeTest.java
create mode 100644 sdk/java-v2/src/test/java/org/arvados/client/utils/FileSplitTest.java
create mode 100644 sdk/java-v2/src/test/resources/application.conf
create mode 100644 sdk/java-v2/src/test/resources/integration-tests-application.conf
create mode 100644 sdk/java-v2/src/test/resources/integration-tests-application.conf.example
create mode 100644 sdk/java-v2/src/test/resources/mockito-extensions/org.mockito.plugins.MockMaker
create mode 100644 sdk/java-v2/src/test/resources/org/arvados/client/api/client/collections-create-manifest.json
create mode 100644 sdk/java-v2/src/test/resources/org/arvados/client/api/client/collections-create-simple.json
create mode 100644 sdk/java-v2/src/test/resources/org/arvados/client/api/client/collections-download-file.json
create mode 100644 sdk/java-v2/src/test/resources/org/arvados/client/api/client/collections-get.json
create mode 100644 sdk/java-v2/src/test/resources/org/arvados/client/api/client/collections-list.json
create mode 100644 sdk/java-v2/src/test/resources/org/arvados/client/api/client/groups-get.json
create mode 100644 sdk/java-v2/src/test/resources/org/arvados/client/api/client/groups-list.json
create mode 100644 sdk/java-v2/src/test/resources/org/arvados/client/api/client/keep-client-test-file.txt
create mode 100644 sdk/java-v2/src/test/resources/org/arvados/client/api/client/keep-services-accessible-disk-only.json
create mode 100644 sdk/java-v2/src/test/resources/org/arvados/client/api/client/keep-services-accessible.json
create mode 100644 sdk/java-v2/src/test/resources/org/arvados/client/api/client/keep-services-get.json
create mode 100644 sdk/java-v2/src/test/resources/org/arvados/client/api/client/keep-services-list.json
create mode 100644 sdk/java-v2/src/test/resources/org/arvados/client/api/client/keep-services-not-accessible.json
create mode 100644 sdk/java-v2/src/test/resources/org/arvados/client/api/client/users-create.json
create mode 100644 sdk/java-v2/src/test/resources/org/arvados/client/api/client/users-get.json
create mode 100644 sdk/java-v2/src/test/resources/org/arvados/client/api/client/users-list.json
create mode 100644 sdk/java-v2/src/test/resources/org/arvados/client/api/client/users-system.json
create mode 100644 sdk/java-v2/src/test/resources/selfsigned.keystore.jks
create mode 100755 sdk/java-v2/test-in-docker.sh
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commit cf1dcfb8715822f7ac5fe4fce067197dd84bad54
Merge: e250e8435 8b65fa06a
Author: Peter Amstutz <pamstutz at veritasgenetics.com>
Date: Tue Apr 23 13:49:25 2019 -0400
Merge branch '14670-new-java-sdk-docs' refs #14670
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz at veritasgenetics.com>
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