[ARVADOS] updated: 1.2.0-87-g3e5ac41e4

[Git user]

Summary of changes:
 apps/workbench/test/integration/work_units_test.rb |  2 +-
 build/build.list                                   |  2 +-
 doc/_includes/_install_compute_docker.liquid       |  3 +-
 .../install-arv-git-httpd.html.textile.liquid      |  8 +--
 doc/install/install-keepstore.html.textile.liquid  |  4 +-
 sdk/cli/arvados-cli.gemspec                        |  6 +-
 sdk/cli/bin/arv                                    | 20 +++----
 sdk/cli/bin/arv-run-pipeline-instance              |  8 +--
 sdk/cli/bin/arv-tag                                | 10 ++--
 sdk/cwl/setup.py                                   |  4 +-
 sdk/cwl/tests/test_container.py                    | 30 +++++++++-
 sdk/cwl/tests/test_job.py                          | 18 +++---
 sdk/cwl/tests/test_submit.py                       | 16 ++---
 sdk/go/arvadosclient/arvadosclient.go              |  7 ++-
 sdk/go/dispatch/dispatch.go                        | 34 ++++++++---
 sdk/python/arvados/commands/run.py                 | 70 +++++++++++++++++-----
 sdk/python/setup.py                                |  2 +-
 sdk/python/tests/run_test_server.py                |  1 +
 sdk/ruby/arvados.gemspec                           |  2 +-
 services/api/app/models/arvados_model.rb           | 16 +++--
 services/api/app/models/container.rb               | 13 ++--
 services/api/app/models/container_request.rb       |  8 ++-
 .../20180824152014_add_md5_index_to_containers.rb  |  8 +++
 services/api/db/structure.sql                      |  9 +++
 services/api/test/fixtures/container_requests.yml  |  2 +-
 services/api/test/unit/container_request_test.rb   |  2 +-
 .../crunch-dispatch-local/crunch-dispatch-local.go | 39 +++++++-----
 .../crunch-dispatch-local_test.go                  | 18 +++---
 .../crunch-dispatch-slurm/crunch-dispatch-slurm.go | 33 +++++++---
 .../crunch-dispatch-slurm_test.go                  | 12 ++--
 services/crunch-dispatch-slurm/squeue.go           | 12 ++--
 services/crunch-dispatch-slurm/squeue_test.go      |  5 ++
 services/login-sync/arvados-login-sync.gemspec     |  2 +-
 33 files changed, 294 insertions(+), 132 deletions(-)
 create mode 100644 services/api/db/migrate/20180824152014_add_md5_index_to_containers.rb

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commit 3e5ac41e4e38e6c8fa72883b803d85fcde53e25b
Merge: b43cf1d33 9d413ff4e
Author: Tom Clegg <tclegg at veritasgenetics.com>
Date:   Tue Sep 4 15:03:58 2018 -0400

    14008: Merge branch 'master' into 14008-containers-index
    
    Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg at veritasgenetics.com>

diff --cc services/api/db/structure.sql
index 37dcfc107,f42dd8d7c..32b77ed17
--- a/services/api/db/structure.sql
+++ b/services/api/db/structure.sql
@@@ -1928,13 -1914,13 +1928,20 @@@ CREATE INDEX index_containers_on_owner_
  
  
  --
 +-- Name: index_containers_on_queued_state; Type: INDEX; Schema: public; Owner: -
 +--
 +
 +CREATE INDEX index_containers_on_queued_state ON public.containers USING btree (state, ((priority > 0)));
 +
 +
 +--
+ -- Name: index_containers_on_reuse_columns; Type: INDEX; Schema: public; Owner: -
+ --
+ 
+ CREATE INDEX index_containers_on_reuse_columns ON public.containers USING btree (md5(command), cwd, md5(environment), output_path, container_image, md5(mounts), secret_mounts_md5, md5(runtime_constraints));
+ 
+ 
+ --
  -- Name: index_containers_on_secret_mounts_md5; Type: INDEX; Schema: public; Owner: -
  --
  
@@@ -3144,9 -3130,7 +3151,11 @@@ INSERT INTO schema_migrations (version
  
  INSERT INTO schema_migrations (version) VALUES ('20180820130357');
  
 +INSERT INTO schema_migrations (version) VALUES ('20180820132617');
 +
  INSERT INTO schema_migrations (version) VALUES ('20180820135808');
  
+ INSERT INTO schema_migrations (version) VALUES ('20180824152014');
+ 
 +INSERT INTO schema_migrations (version) VALUES ('20180824155207');
 +

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