[ARVADOS] updated: 1.2.0-464-ge36e81150

Git user git at public.curoverse.com
Thu Nov 29 09:34:22 EST 2018


Summary of changes:
 .licenseignore                                     |   2 +
 apps/workbench/app/helpers/application_helper.rb   |   3 +-
 .../test/controllers/projects_controller_test.rb   |  18 ++
 build/build.list                                   |   2 +-
 build/run-build-packages.sh                        |  31 ++-
 build/run-library.sh                               |   2 +-
 doc/_config.yml                                    |   7 +-
 doc/_includes/_federated_cwl.liquid                |   1 +
 doc/_includes/_shards_yml.liquid                   |   1 +
 doc/admin/upgrading.html.textile.liquid            |   4 +
 doc/api/methods.html.textile.liquid                |   6 +-
 .../methods/container_requests.html.textile.liquid |   2 +-
 doc/index.html.liquid                              |   2 +-
 doc/sdk/python/arvados-fuse.html.textile.liquid    |   2 +-
 doc/user/cwl/cwl-extensions.html.textile.liquid    |  23 ++
 doc/user/cwl/cwl-run-options.html.textile.liquid   |  57 +++--
 doc/user/cwl/federated-workflow.odg                | Bin 0 -> 12089 bytes
 doc/user/cwl/federated-workflow.svg                | 239 +++++++++++++++++++++
 .../cwl/federated-workflows.html.textile.liquid    |  57 +++++
 .../cases => doc/user/cwl/federated}/cat.cwl       |   0
 doc/user/cwl/federated/federated.cwl               |  87 ++++++++
 doc/user/cwl/federated/file-on-clsr1.dat           |   1 +
 doc/user/cwl/federated/file-on-clsr2.dat           |   1 +
 doc/user/cwl/federated/file-on-clsr3.dat           |   1 +
 .../cases => doc/user/cwl/federated}/md5sum.cwl    |   2 +-
 doc/user/cwl/federated/shards.yml                  |  18 ++
 doc/user/index.html.textile.liquid                 |   7 +-
 .../tutorials/intro-crunch.html.textile.liquid     |   1 -
 .../tutorial-keep-get.html.textile.liquid          |  13 ++
 ...orial-keep-mount-gnu-linux.html.textile.liquid} |   4 +-
 .../tutorial-keep-mount-os-x.html.textile.liquid   |  24 +++
 ...tutorial-keep-mount-windows.html.textile.liquid |  24 +++
 sdk/cwl/arvados_cwl/__init__.py                    |   7 +-
 sdk/cwl/arvados_cwl/arvtool.py                     |  28 ++-
 sdk/cwl/arvados_cwl/arvworkflow.py                 |   5 +-
 .../58118E89F3A912897C070ADBF76221572C52609D.asc   | 106 +++++++++
 tools/arvbox/lib/arvbox/docker/Dockerfile.base     |   5 +-
 37 files changed, 746 insertions(+), 47 deletions(-)
 create mode 120000 doc/_includes/_federated_cwl.liquid
 create mode 120000 doc/_includes/_shards_yml.liquid
 create mode 100644 doc/user/cwl/federated-workflow.odg
 create mode 100644 doc/user/cwl/federated-workflow.svg
 create mode 100644 doc/user/cwl/federated-workflows.html.textile.liquid
 copy {sdk/cwl/tests/federation/cases => doc/user/cwl/federated}/cat.cwl (100%)
 create mode 100644 doc/user/cwl/federated/federated.cwl
 create mode 100644 doc/user/cwl/federated/file-on-clsr1.dat
 create mode 100644 doc/user/cwl/federated/file-on-clsr2.dat
 create mode 100644 doc/user/cwl/federated/file-on-clsr3.dat
 copy {sdk/cwl/tests/federation/cases => doc/user/cwl/federated}/md5sum.cwl (98%)
 create mode 100644 doc/user/cwl/federated/shards.yml
 rename doc/user/tutorials/{tutorial-keep-mount.html.textile.liquid => tutorial-keep-mount-gnu-linux.html.textile.liquid} (94%)
 create mode 100644 doc/user/tutorials/tutorial-keep-mount-os-x.html.textile.liquid
 create mode 100644 doc/user/tutorials/tutorial-keep-mount-windows.html.textile.liquid
 create mode 100644 tools/arvbox/lib/arvbox/docker/58118E89F3A912897C070ADBF76221572C52609D.asc

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Those revisions listed above that are new to this repository have
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commit e36e81150649a6457c9cbf0101130cfdb776336f
Merge: 78c18757e ff48e70fd
Author: Tom Clegg <tclegg at veritasgenetics.com>
Date:   Thu Nov 29 09:33:53 2018 -0500

    14538: Merge branch 'master' into 14538-async-write
    
    Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg at veritasgenetics.com>


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