[ARVADOS] updated: 1.2.0-329-g448138a8a

Git user git at public.curoverse.com
Thu Nov 8 22:20:08 EST 2018


Summary of changes:
 .../arvbox-fed.cwl => arvbox-make-federation.cwl}  |  8 ++---
 sdk/cwl/tests/federation/arvbox/arvbox-main.cwl    | 38 ----------------------
 .../{arvbox-fed-config.cwl => fed-config.cwl}      |  0
 .../arvbox/{arvbox-mkdir.cwl => mkdir.cwl}         |  0
 .../{arvbox-setup-user.cwl => setup-user.cwl}      |  0
 .../federation/{framework => arvbox}/setup_user.py |  0
 .../arvbox/{arvbox-start.cwl => start.cwl}         |  0
 .../arvbox/{arvbox-stop.cwl => stop.cwl}           |  0
 8 files changed, 4 insertions(+), 42 deletions(-)
 rename sdk/cwl/tests/federation/{arvbox/arvbox-fed.cwl => arvbox-make-federation.cwl} (94%)
 delete mode 100644 sdk/cwl/tests/federation/arvbox/arvbox-main.cwl
 rename sdk/cwl/tests/federation/arvbox/{arvbox-fed-config.cwl => fed-config.cwl} (100%)
 rename sdk/cwl/tests/federation/arvbox/{arvbox-mkdir.cwl => mkdir.cwl} (100%)
 rename sdk/cwl/tests/federation/arvbox/{arvbox-setup-user.cwl => setup-user.cwl} (100%)
 rename sdk/cwl/tests/federation/{framework => arvbox}/setup_user.py (100%)
 rename sdk/cwl/tests/federation/arvbox/{arvbox-start.cwl => start.cwl} (100%)
 rename sdk/cwl/tests/federation/arvbox/{arvbox-stop.cwl => stop.cwl} (100%)

       via  448138a8a6311076dbca802aaa5ea1e624c63d29 (commit)
      from  001bb11415036a72fb19d97f5ef933685b0e4451 (commit)

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commit 448138a8a6311076dbca802aaa5ea1e624c63d29
Author: Peter Amstutz <pamstutz at veritasgenetics.com>
Date:   Thu Nov 8 22:19:15 2018 -0500

    14198: Refactor arvbox federation setup
    
    Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz at veritasgenetics.com>

diff --git a/sdk/cwl/tests/federation/arvbox/arvbox-fed.cwl b/sdk/cwl/tests/federation/arvbox-make-federation.cwl
similarity index 94%
rename from sdk/cwl/tests/federation/arvbox/arvbox-fed.cwl
rename to sdk/cwl/tests/federation/arvbox-make-federation.cwl
index 91e622022..9a08195a7 100644
--- a/sdk/cwl/tests/federation/arvbox/arvbox-fed.cwl
+++ b/sdk/cwl/tests/federation/arvbox-make-federation.cwl
@@ -44,7 +44,7 @@ steps:
       containers: containers
       arvbox_base: arvbox_base
     out: [arvbox_data]
-    run: arvbox-mkdir.cwl
+    run: arvbox/mkdir.cwl
   start:
     in:
       container_name: containers
@@ -52,7 +52,7 @@ steps:
     out: [cluster_id, container_host, arvbox_data_out, superuser_token]
     scatter: [container_name, arvbox_data]
     scatterMethod: dotproduct
-    run: arvbox-start.cwl
+    run: arvbox/start.cwl
   fed-config:
     in:
       container_name: containers
@@ -63,10 +63,10 @@ steps:
     out: []
     scatter: [container_name, this_cluster_id, arvbox_data]
     scatterMethod: dotproduct
-    run: arvbox-fed-config.cwl
+    run: arvbox/fed-config.cwl
   setup-user:
     in:
       container_host: {source: start/container_host, valueFrom: "$(self[0])"}
       superuser_token: {source: start/superuser_token, valueFrom: "$(self[0])"}
     out: [test_user_uuid, test_user_token]
-    run: arvbox-setup-user.cwl
+    run: arvbox/setup-user.cwl
diff --git a/sdk/cwl/tests/federation/arvbox/arvbox-main.cwl b/sdk/cwl/tests/federation/arvbox/arvbox-main.cwl
deleted file mode 100644
index a6fd00823..000000000
--- a/sdk/cwl/tests/federation/arvbox/arvbox-main.cwl
+++ /dev/null
@@ -1,38 +0,0 @@
-# Copyright (C) The Arvados Authors. All rights reserved.
-#
-# SPDX-License-Identifier: Apache-2.0
-
-cwlVersion: v1.0
-class: Workflow
-$namespaces:
-  arv: "http://arvados.org/cwl#"
-  cwltool: "http://commonwl.org/cwltool#"
-requirements:
-  cwltool:LoadListingRequirement:
-    loadListing: no_listing
-  SubworkflowFeatureRequirement: {}
-inputs:
-  arvbox_base: Directory
-  acr: string?
-outputs: []
-steps:
-  run-arvbox:
-    in:
-      containers:
-        default: [fedbox1, fedbox2, fedbox3]
-      arvbox_base: arvbox_base
-    out: [cluster_ids, container_hosts, test_user_uuid, test_user_token]
-    run: arvbox-fed.cwl
-  run-main:
-    in:
-      arvados_api_host_home: {source: run-arvbox/container_hosts, valueFrom: "$(self[0])"}
-      arvados_home_id: {source: run-arvbox/cluster_ids, valueFrom: "$(self[0])"}
-      arvados_api_token: run-arvbox/test_user_token
-      arvado_api_host_insecure: {default: true}
-      arvados_api_host_clusterB: {source: run-arvbox/container_hosts, valueFrom: "$(self[1])"}
-      arvados_clusterB_id: {source: run-arvbox/cluster_ids, valueFrom: "$(self[1])"}
-      arvados_api_host_clusterC: {source: run-arvbox/container_hosts, valueFrom: "$(self[2])"}
-      arvados_clusterC_id: {source: run-arvbox/cluster_ids, valueFrom: "$(self[2])"}
-      acr: acr
-    out: [base-case-out, runner-home-step-remote-out]
-    run: main.cwl
diff --git a/sdk/cwl/tests/federation/arvbox/arvbox-fed-config.cwl b/sdk/cwl/tests/federation/arvbox/fed-config.cwl
similarity index 100%
rename from sdk/cwl/tests/federation/arvbox/arvbox-fed-config.cwl
rename to sdk/cwl/tests/federation/arvbox/fed-config.cwl
diff --git a/sdk/cwl/tests/federation/arvbox/arvbox-mkdir.cwl b/sdk/cwl/tests/federation/arvbox/mkdir.cwl
similarity index 100%
rename from sdk/cwl/tests/federation/arvbox/arvbox-mkdir.cwl
rename to sdk/cwl/tests/federation/arvbox/mkdir.cwl
diff --git a/sdk/cwl/tests/federation/arvbox/arvbox-setup-user.cwl b/sdk/cwl/tests/federation/arvbox/setup-user.cwl
similarity index 100%
rename from sdk/cwl/tests/federation/arvbox/arvbox-setup-user.cwl
rename to sdk/cwl/tests/federation/arvbox/setup-user.cwl
diff --git a/sdk/cwl/tests/federation/framework/setup_user.py b/sdk/cwl/tests/federation/arvbox/setup_user.py
similarity index 100%
rename from sdk/cwl/tests/federation/framework/setup_user.py
rename to sdk/cwl/tests/federation/arvbox/setup_user.py
diff --git a/sdk/cwl/tests/federation/arvbox/arvbox-start.cwl b/sdk/cwl/tests/federation/arvbox/start.cwl
similarity index 100%
rename from sdk/cwl/tests/federation/arvbox/arvbox-start.cwl
rename to sdk/cwl/tests/federation/arvbox/start.cwl
diff --git a/sdk/cwl/tests/federation/arvbox/arvbox-stop.cwl b/sdk/cwl/tests/federation/arvbox/stop.cwl
similarity index 100%
rename from sdk/cwl/tests/federation/arvbox/arvbox-stop.cwl
rename to sdk/cwl/tests/federation/arvbox/stop.cwl

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