[ARVADOS] updated: 1.2.0-329-g448138a8a
Git user
git at public.curoverse.com
Thu Nov 8 22:20:08 EST 2018
Summary of changes:
.../arvbox-fed.cwl => arvbox-make-federation.cwl} | 8 ++---
sdk/cwl/tests/federation/arvbox/arvbox-main.cwl | 38 ----------------------
.../{arvbox-fed-config.cwl => fed-config.cwl} | 0
.../arvbox/{arvbox-mkdir.cwl => mkdir.cwl} | 0
.../{arvbox-setup-user.cwl => setup-user.cwl} | 0
.../federation/{framework => arvbox}/setup_user.py | 0
.../arvbox/{arvbox-start.cwl => start.cwl} | 0
.../arvbox/{arvbox-stop.cwl => stop.cwl} | 0
8 files changed, 4 insertions(+), 42 deletions(-)
rename sdk/cwl/tests/federation/{arvbox/arvbox-fed.cwl => arvbox-make-federation.cwl} (94%)
delete mode 100644 sdk/cwl/tests/federation/arvbox/arvbox-main.cwl
rename sdk/cwl/tests/federation/arvbox/{arvbox-fed-config.cwl => fed-config.cwl} (100%)
rename sdk/cwl/tests/federation/arvbox/{arvbox-mkdir.cwl => mkdir.cwl} (100%)
rename sdk/cwl/tests/federation/arvbox/{arvbox-setup-user.cwl => setup-user.cwl} (100%)
rename sdk/cwl/tests/federation/{framework => arvbox}/setup_user.py (100%)
rename sdk/cwl/tests/federation/arvbox/{arvbox-start.cwl => start.cwl} (100%)
rename sdk/cwl/tests/federation/arvbox/{arvbox-stop.cwl => stop.cwl} (100%)
via 448138a8a6311076dbca802aaa5ea1e624c63d29 (commit)
from 001bb11415036a72fb19d97f5ef933685b0e4451 (commit)
Those revisions listed above that are new to this repository have
not appeared on any other notification email; so we list those
revisions in full, below.
commit 448138a8a6311076dbca802aaa5ea1e624c63d29
Author: Peter Amstutz <pamstutz at veritasgenetics.com>
Date: Thu Nov 8 22:19:15 2018 -0500
14198: Refactor arvbox federation setup
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz at veritasgenetics.com>
diff --git a/sdk/cwl/tests/federation/arvbox/arvbox-fed.cwl b/sdk/cwl/tests/federation/arvbox-make-federation.cwl
similarity index 94%
rename from sdk/cwl/tests/federation/arvbox/arvbox-fed.cwl
rename to sdk/cwl/tests/federation/arvbox-make-federation.cwl
index 91e622022..9a08195a7 100644
--- a/sdk/cwl/tests/federation/arvbox/arvbox-fed.cwl
+++ b/sdk/cwl/tests/federation/arvbox-make-federation.cwl
@@ -44,7 +44,7 @@ steps:
containers: containers
arvbox_base: arvbox_base
out: [arvbox_data]
- run: arvbox-mkdir.cwl
+ run: arvbox/mkdir.cwl
start:
in:
container_name: containers
@@ -52,7 +52,7 @@ steps:
out: [cluster_id, container_host, arvbox_data_out, superuser_token]
scatter: [container_name, arvbox_data]
scatterMethod: dotproduct
- run: arvbox-start.cwl
+ run: arvbox/start.cwl
fed-config:
in:
container_name: containers
@@ -63,10 +63,10 @@ steps:
out: []
scatter: [container_name, this_cluster_id, arvbox_data]
scatterMethod: dotproduct
- run: arvbox-fed-config.cwl
+ run: arvbox/fed-config.cwl
setup-user:
in:
container_host: {source: start/container_host, valueFrom: "$(self[0])"}
superuser_token: {source: start/superuser_token, valueFrom: "$(self[0])"}
out: [test_user_uuid, test_user_token]
- run: arvbox-setup-user.cwl
+ run: arvbox/setup-user.cwl
diff --git a/sdk/cwl/tests/federation/arvbox/arvbox-main.cwl b/sdk/cwl/tests/federation/arvbox/arvbox-main.cwl
deleted file mode 100644
index a6fd00823..000000000
--- a/sdk/cwl/tests/federation/arvbox/arvbox-main.cwl
+++ /dev/null
@@ -1,38 +0,0 @@
-# Copyright (C) The Arvados Authors. All rights reserved.
-#
-# SPDX-License-Identifier: Apache-2.0
-
-cwlVersion: v1.0
-class: Workflow
-$namespaces:
- arv: "http://arvados.org/cwl#"
- cwltool: "http://commonwl.org/cwltool#"
-requirements:
- cwltool:LoadListingRequirement:
- loadListing: no_listing
- SubworkflowFeatureRequirement: {}
-inputs:
- arvbox_base: Directory
- acr: string?
-outputs: []
-steps:
- run-arvbox:
- in:
- containers:
- default: [fedbox1, fedbox2, fedbox3]
- arvbox_base: arvbox_base
- out: [cluster_ids, container_hosts, test_user_uuid, test_user_token]
- run: arvbox-fed.cwl
- run-main:
- in:
- arvados_api_host_home: {source: run-arvbox/container_hosts, valueFrom: "$(self[0])"}
- arvados_home_id: {source: run-arvbox/cluster_ids, valueFrom: "$(self[0])"}
- arvados_api_token: run-arvbox/test_user_token
- arvado_api_host_insecure: {default: true}
- arvados_api_host_clusterB: {source: run-arvbox/container_hosts, valueFrom: "$(self[1])"}
- arvados_clusterB_id: {source: run-arvbox/cluster_ids, valueFrom: "$(self[1])"}
- arvados_api_host_clusterC: {source: run-arvbox/container_hosts, valueFrom: "$(self[2])"}
- arvados_clusterC_id: {source: run-arvbox/cluster_ids, valueFrom: "$(self[2])"}
- acr: acr
- out: [base-case-out, runner-home-step-remote-out]
- run: main.cwl
diff --git a/sdk/cwl/tests/federation/arvbox/arvbox-fed-config.cwl b/sdk/cwl/tests/federation/arvbox/fed-config.cwl
similarity index 100%
rename from sdk/cwl/tests/federation/arvbox/arvbox-fed-config.cwl
rename to sdk/cwl/tests/federation/arvbox/fed-config.cwl
diff --git a/sdk/cwl/tests/federation/arvbox/arvbox-mkdir.cwl b/sdk/cwl/tests/federation/arvbox/mkdir.cwl
similarity index 100%
rename from sdk/cwl/tests/federation/arvbox/arvbox-mkdir.cwl
rename to sdk/cwl/tests/federation/arvbox/mkdir.cwl
diff --git a/sdk/cwl/tests/federation/arvbox/arvbox-setup-user.cwl b/sdk/cwl/tests/federation/arvbox/setup-user.cwl
similarity index 100%
rename from sdk/cwl/tests/federation/arvbox/arvbox-setup-user.cwl
rename to sdk/cwl/tests/federation/arvbox/setup-user.cwl
diff --git a/sdk/cwl/tests/federation/framework/setup_user.py b/sdk/cwl/tests/federation/arvbox/setup_user.py
similarity index 100%
rename from sdk/cwl/tests/federation/framework/setup_user.py
rename to sdk/cwl/tests/federation/arvbox/setup_user.py
diff --git a/sdk/cwl/tests/federation/arvbox/arvbox-start.cwl b/sdk/cwl/tests/federation/arvbox/start.cwl
similarity index 100%
rename from sdk/cwl/tests/federation/arvbox/arvbox-start.cwl
rename to sdk/cwl/tests/federation/arvbox/start.cwl
diff --git a/sdk/cwl/tests/federation/arvbox/arvbox-stop.cwl b/sdk/cwl/tests/federation/arvbox/stop.cwl
similarity index 100%
rename from sdk/cwl/tests/federation/arvbox/arvbox-stop.cwl
rename to sdk/cwl/tests/federation/arvbox/stop.cwl
-----------------------------------------------------------------------
hooks/post-receive
--
More information about the arvados-commits
mailing list