[ARVADOS] updated: 1.1.4-365-ge348366
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git at public.curoverse.com
Thu Jun 7 13:14:07 EDT 2018
Summary of changes:
sdk/cwl/tests/test_pathmapper.py | 19 +------------------
1 file changed, 1 insertion(+), 18 deletions(-)
via e3483661acc3d26d4532a536bd40ed761c21d7d1 (commit)
from 57fcaf45fe40806dca5f001aabed9b413243183e (commit)
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commit e3483661acc3d26d4532a536bd40ed761c21d7d1
Author: Peter Amstutz <pamstutz at veritasgenetics.com>
Date: Thu Jun 7 13:13:53 2018 -0400
11907: Fix tests
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz at veritasgenetics.com>
diff --git a/sdk/cwl/tests/test_pathmapper.py b/sdk/cwl/tests/test_pathmapper.py
index 9649b83..eaa5711 100644
--- a/sdk/cwl/tests/test_pathmapper.py
+++ b/sdk/cwl/tests/test_pathmapper.py
@@ -20,7 +20,7 @@ from .mock_discovery import get_rootDesc
from arvados_cwl.pathmapper import ArvPathMapper
-def upload_mock(files, api, dry_run=False, num_retries=0, project=None, fnPattern="$(file %s/%s)", name=None, collection=None):
+def upload_mock(files, api, dry_run=False, num_retries=0, project=None, fnPattern="$(file %s/%s)", name=None, collection=None, packed=None):
pdh = "99999999999999999999999999999991+99"
for c in files:
c.keepref = "%s/%s" % (pdh, os.path.basename(c.fn))
@@ -67,23 +67,6 @@ class TestPathmap(unittest.TestCase):
p._pathmap)
@mock.patch("arvados.commands.run.uploadfiles")
- def test_prev_uploaded(self, upl):
- """Test pathmapper handling previously uploaded files."""
-
- arvrunner = arvados_cwl.ArvCwlRunner(self.api)
- arvrunner.add_uploaded('file:tests/hw.py', MapperEnt(resolved='keep:99999999999999999999999999999992+99/hw.py', target='', type='File', staged=True))
-
- upl.side_effect = upload_mock
-
- p = ArvPathMapper(arvrunner, [{
- "class": "File",
- "location": "file:tests/hw.py"
- }], "", "/test/%s", "/test/%s/%s")
-
- self.assertEqual({'file:tests/hw.py': MapperEnt(resolved='keep:99999999999999999999999999999992+99/hw.py', target='/test/99999999999999999999999999999992+99/hw.py', type='File', staged=True)},
- p._pathmap)
-
- @mock.patch("arvados.commands.run.uploadfiles")
@mock.patch("arvados.commands.run.statfile")
def test_statfile(self, statfile, upl):
"""Test pathmapper handling ArvFile references."""
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