[ARVADOS] updated: 1.1.4-353-g76f6b35
Git user
git at public.curoverse.com
Fri Jun 1 11:42:15 EDT 2018
Summary of changes:
sdk/R/README.Rmd | 2 +-
sdk/cwl/arvados_cwl/__init__.py | 9 +-
sdk/cwl/arvados_cwl/arvcontainer.py | 32 ++-
sdk/cwl/arvados_cwl/arvworkflow.py | 1 +
sdk/cwl/arvados_cwl/crunch_script.py | 1 +
sdk/cwl/arvados_cwl/http.py | 141 ++++++++++
sdk/cwl/arvados_cwl/pathmapper.py | 6 +
sdk/cwl/arvados_version.py | 2 +-
sdk/cwl/setup.py | 4 +-
sdk/cwl/tests/test_container.py | 16 +-
sdk/cwl/tests/test_http.py | 286 +++++++++++++++++++++
sdk/cwl/tests/test_job.py | 6 +-
sdk/cwl/tests/test_submit.py | 29 ++-
services/keep-balance/balance.go | 40 +--
services/keepstore/s3_volume.go | 4 +-
.../nodemanager/arvnodeman/computenode/__init__.py | 2 +-
.../nodemanager/arvnodeman/test/fake_driver.py | 13 +-
services/nodemanager/tests/test_computenode.py | 6 +
services/nodemanager/tests/test_daemon.py | 44 ++--
services/nodemanager/tests/test_failure.py | 5 +-
20 files changed, 583 insertions(+), 66 deletions(-)
create mode 100644 sdk/cwl/arvados_cwl/http.py
create mode 100644 sdk/cwl/tests/test_http.py
via 76f6b358cf612e67b586452236394feabc464373 (commit)
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from 00cca6a192eb1ab38559bf5ed9044711ed56fc4a (commit)
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commit 76f6b358cf612e67b586452236394feabc464373
Author: Lucas Di Pentima <ldipentima at veritasgenetics.com>
Date: Fri Jun 1 12:41:44 2018 -0300
7478: Fixes integration tests.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima at veritasgenetics.com>
diff --git a/services/nodemanager/arvnodeman/test/fake_driver.py b/services/nodemanager/arvnodeman/test/fake_driver.py
index 978c6aa..11ba271 100644
--- a/services/nodemanager/arvnodeman/test/fake_driver.py
+++ b/services/nodemanager/arvnodeman/test/fake_driver.py
@@ -43,6 +43,9 @@ class FakeDriver(NodeDriver):
global all_nodes, create_calls
create_calls += 1
nodeid = "node%i" % create_calls
+ if ex_tags is None:
+ ex_tags = {}
+ ex_tags.update({'arvados_node_size': size.id})
n = Node(nodeid, nodeid, NodeState.RUNNING, [], [], self, size=size, extra={"tags": ex_tags})
all_nodes.append(n)
if ex_customdata:
@@ -161,7 +164,12 @@ class FakeAwsDriver(FakeDriver):
auth=auth,
ex_metadata=ex_metadata,
ex_userdata=ex_userdata)
- n.extra = {"launch_time": time.strftime(ARVADOS_TIMEFMT, time.gmtime())[:-1]}
+ n.extra = {
+ "launch_time": time.strftime(ARVADOS_TIMEFMT, time.gmtime())[:-1],
+ "metadata" : {
+ "arvados_node_size": size.id
+ }
+ }
return n
def list_sizes(self, **kwargs):
@@ -187,7 +195,8 @@ class FakeGceDriver(FakeDriver):
ex_metadata=ex_metadata)
n.extra = {
"metadata": {
- "items": [{"key": k, "value": v} for k,v in ex_metadata.iteritems()]
+ "items": [{"key": k, "value": v} for k,v in ex_metadata.iteritems()],
+ "arvados_node_size": size.id
},
"zone": "fake"
}
commit 5836e576fe0b78c50383cf56e1c4fb4521daeca1
Merge: 00cca6a 1bff2ab
Author: Lucas Di Pentima <ldipentima at veritasgenetics.com>
Date: Thu May 31 16:24:07 2018 -0300
Merge branch 'master' into 7478-anm-spot-instances
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima at veritasgenetics.com>
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