[ARVADOS] updated: 1.1.4-762-gdf2f83652
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git at public.curoverse.com
Fri Aug 10 10:39:38 EDT 2018
Summary of changes:
sdk/cwl/arvados_cwl/runner.py | 2 ++
1 file changed, 2 insertions(+)
via df2f836528899ae50ee4a07b10c47d5d08f59366 (commit)
from 32d403dd4d791e88ee93ddda7865a1566e3da116 (commit)
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commit df2f836528899ae50ee4a07b10c47d5d08f59366
Author: Peter Amstutz <pamstutz at veritasgenetics.com>
Date: Fri Aug 10 10:30:55 2018 -0400
13976: Add code comment about only_real in upload_dependencies
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz at veritasgenetics.com>
diff --git a/sdk/cwl/arvados_cwl/runner.py b/sdk/cwl/arvados_cwl/runner.py
index 79be88191..29c0535d9 100644
--- a/sdk/cwl/arvados_cwl/runner.py
+++ b/sdk/cwl/arvados_cwl/runner.py
@@ -129,6 +129,8 @@ def upload_dependencies(arvrunner, name, document_loader,
sc = []
def only_real(obj):
+ # Only interested in local files than need to be uploaded,
+ # don't include file literals, keep references, etc.
if obj.get("location", "").startswith("file:"):
sc.append(obj)
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