[ARVADOS] created: 1.1.4-175-gc4eeb32
Git user
git at public.curoverse.com
Thu Apr 26 16:47:41 EDT 2018
at c4eeb3201ba14a55b403e1601e3c9c923d699b67 (commit)
commit c4eeb3201ba14a55b403e1601e3c9c923d699b67
Author: Peter Amstutz <pamstutz at veritasgenetics.com>
Date: Thu Apr 26 16:45:01 2018 -0400
13338: Running workflow from workbench puts collections in correct project.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz at veritasgenetics.com>
diff --git a/apps/workbench/app/controllers/work_units_controller.rb b/apps/workbench/app/controllers/work_units_controller.rb
index d289682..0b0cdb4 100644
--- a/apps/workbench/app/controllers/work_units_controller.rb
+++ b/apps/workbench/app/controllers/work_units_controller.rb
@@ -85,7 +85,12 @@ class WorkUnitsController < ApplicationController
attrs['state'] = "Uncommitted"
# required
- attrs['command'] = ["arvados-cwl-runner", "--local", "--api=containers", "/var/lib/cwl/workflow.json#main", "/var/lib/cwl/cwl.input.json"]
+ attrs['command'] = ["arvados-cwl-runner",
+ "--local",
+ "--api=containers",
+ "--project-uuid=#{params['work_unit']['owner_uuid']}",
+ "/var/lib/cwl/workflow.json#main",
+ "/var/lib/cwl/cwl.input.json"]
attrs['container_image'] = "arvados/jobs"
attrs['cwd'] = "/var/spool/cwl"
attrs['output_path'] = "/var/spool/cwl"
-----------------------------------------------------------------------
hooks/post-receive
--
More information about the arvados-commits
mailing list