[ARVADOS] created: 2f2cf8be3c3082915331f3f4dad4b14c1867c36c
Git user
git at public.curoverse.com
Fri May 26 14:48:23 EDT 2017
at 2f2cf8be3c3082915331f3f4dad4b14c1867c36c (commit)
commit 2f2cf8be3c3082915331f3f4dad4b14c1867c36c
Author: Peter Amstutz <peter.amstutz at curoverse.com>
Date: Fri May 26 14:48:16 2017 -0400
11767: Correctly parse values with unit suffixes printed by squeue.
diff --git a/services/nodemanager/arvnodeman/jobqueue.py b/services/nodemanager/arvnodeman/jobqueue.py
index 66cf73a..73851d7 100644
--- a/services/nodemanager/arvnodeman/jobqueue.py
+++ b/services/nodemanager/arvnodeman/jobqueue.py
@@ -117,6 +117,19 @@ class JobQueueMonitorActor(clientactor.RemotePollLoopActor):
client, timer_actor, *args, **kwargs)
self._calculator = server_calc
+ @staticmethod
+ def coerce_to_mb(x):
+ if x.endswith("M"):
+ return int(x[:-1])
+ if x.endswith("G"):
+ return int(x[:-1]) * 2**10
+ if x.endswith("T"):
+ return int(x[:-1]) * 2**20
+ if x.endswith("P"):
+ return int(x[:-1]) * 2**30
+ else:
+ return int(x)
+
def _send_request(self):
# cpus, memory, tempory disk space, reason, job name
squeue_out = subprocess.check_output(["squeue", "--state=PENDING", "--noheader", "--format=%c %m %d %r %j"])
@@ -128,8 +141,8 @@ class JobQueueMonitorActor(clientactor.RemotePollLoopActor):
"uuid": jobname,
"runtime_constraints": {
"min_cores_per_node": cpu,
- "min_ram_mb_per_node": ram,
- "min_scratch_mb_per_node": disk
+ "min_ram_mb_per_node": self.coerce_to_mb(ram),
+ "min_scratch_mb_per_node": self.coerce_to_mb(disk)
}
})
diff --git a/services/nodemanager/tests/test_jobqueue.py b/services/nodemanager/tests/test_jobqueue.py
index 08a8131..8d9c54c 100644
--- a/services/nodemanager/tests/test_jobqueue.py
+++ b/services/nodemanager/tests/test_jobqueue.py
@@ -150,17 +150,44 @@ class JobQueueMonitorActorTestCase(testutil.RemotePollLoopActorTestMixin,
@mock.patch("subprocess.check_output")
def test_squeue_server_list(self, mock_squeue):
- mock_squeue.return_value = """1 0 0 Resources zzzzz-zzzzz-zzzzzzzzzzzzzzy
-2 0 0 Resources zzzzz-zzzzz-zzzzzzzzzzzzzzz
+ mock_squeue.return_value = """1 1024 0 Resources zzzzz-zzzzz-zzzzzzzzzzzzzzy
+2 1024 0 Resources zzzzz-zzzzz-zzzzzzzzzzzzzzz
"""
super(JobQueueMonitorActorTestCase, self).build_monitor(jobqueue.ServerCalculator(
- [(testutil.MockSize(n), {'cores': n, 'ram': n, 'scratch': n}) for n in range(1, 3)]))
+ [(testutil.MockSize(n), {'cores': n, 'ram': n*1024, 'scratch': n}) for n in range(1, 3)]))
self.monitor.subscribe(self.subscriber).get(self.TIMEOUT)
self.stop_proxy(self.monitor)
self.subscriber.assert_called_with([testutil.MockSize(1),
testutil.MockSize(2)])
+ @mock.patch("subprocess.check_output")
+ def test_squeue_server_list_suffix(self, mock_squeue):
+ mock_squeue.return_value = """1 1024M 0 Resources zzzzz-zzzzz-zzzzzzzzzzzzzzy
+1 2G 0 Resources zzzzz-zzzzz-zzzzzzzzzzzzzzz
+"""
+
+ super(JobQueueMonitorActorTestCase, self).build_monitor(jobqueue.ServerCalculator(
+ [(testutil.MockSize(n), {'cores': n, 'ram': n*1024, 'scratch': n}) for n in range(1, 3)]))
+ self.monitor.subscribe(self.subscriber).get(self.TIMEOUT)
+ self.stop_proxy(self.monitor)
+ self.subscriber.assert_called_with([testutil.MockSize(1),
+ testutil.MockSize(2)])
+
+ def test_coerce_to_mb(self):
+ self.assertEqual(1, jobqueue.JobQueueMonitorActor.coerce_to_mb("1"))
+ self.assertEqual(512, jobqueue.JobQueueMonitorActor.coerce_to_mb("512"))
+ self.assertEqual(512, jobqueue.JobQueueMonitorActor.coerce_to_mb("512M"))
+ self.assertEqual(1024, jobqueue.JobQueueMonitorActor.coerce_to_mb("1024M"))
+ self.assertEqual(1024, jobqueue.JobQueueMonitorActor.coerce_to_mb("1G"))
+ self.assertEqual(2048, jobqueue.JobQueueMonitorActor.coerce_to_mb("2G"))
+ self.assertEqual(1025, jobqueue.JobQueueMonitorActor.coerce_to_mb("1025M"))
+ self.assertEqual(1048576, jobqueue.JobQueueMonitorActor.coerce_to_mb("1T"))
+ self.assertEqual(1073741824, jobqueue.JobQueueMonitorActor.coerce_to_mb("1P"))
+ self.assertEqual(0, jobqueue.JobQueueMonitorActor.coerce_to_mb("0"))
+ self.assertEqual(0, jobqueue.JobQueueMonitorActor.coerce_to_mb("0M"))
+ self.assertEqual(0, jobqueue.JobQueueMonitorActor.coerce_to_mb("0G"))
+
if __name__ == '__main__':
unittest.main()
-----------------------------------------------------------------------
hooks/post-receive
--
More information about the arvados-commits
mailing list