[ARVADOS] updated: fe45b1b66c730f2546d78a7899375707c0816518
Git user
git at public.curoverse.com
Tue May 2 10:55:17 EDT 2017
Summary of changes:
...nstall-manual-prerequisites.html.textile.liquid | 10 +-
sdk/cwl/arvados_cwl/arvcontainer.py | 62 +-
sdk/cwl/arvados_cwl/arvjob.py | 8 +-
sdk/cwl/arvados_cwl/arvworkflow.py | 5 +-
sdk/cwl/arvados_cwl/crunch_script.py | 3 +-
sdk/cwl/arvados_cwl/pathmapper.py | 16 +
sdk/cwl/arvados_cwl/runner.py | 18 +-
sdk/cwl/tests/test_container.py | 84 +++
sdk/go/arvadosclient/arvadosclient_test.go | 7 +-
sdk/go/keepclient/discover.go | 15 +-
sdk/go/keepclient/keepclient.go | 22 +-
sdk/go/keepclient/keepclient_test.go | 20 +-
sdk/go/keepclient/support.go | 98 +--
sdk/python/tests/run_test_server.py | 5 +-
sdk/ruby/lib/arvados.rb | 23 +-
sdk/ruby/lib/arvados/keep.rb | 6 +-
services/api/.gitignore | 3 +-
services/api/Gemfile | 53 +-
services/api/Gemfile.lock | 279 ++++----
services/api/Rakefile | 6 -
.../api/app/controllers/application_controller.rb | 14 +-
.../app/controllers/arvados/v1/nodes_controller.rb | 6 +-
.../controllers/arvados/v1/schema_controller.rb | 7 +-
.../app/controllers/arvados/v1/users_controller.rb | 2 +-
.../api/app/controllers/database_controller.rb | 4 +-
.../app/controllers/user_sessions_controller.rb | 3 +-
.../api/app/models/api_client_authorization.rb | 8 +-
services/api/app/models/arvados_model.rb | 99 ++-
services/api/app/models/collection.rb | 2 +-
services/api/app/models/link.rb | 5 -
services/api/app/models/log.rb | 2 +-
services/api/app/models/user.rb | 8 +-
services/api/app/models/virtual_machine.rb | 6 +-
services/api/config/application.default.yml | 36 +-
services/api/config/application.rb | 29 +-
.../api/config/environments/development.rb.example | 3 -
.../api/config/environments/production.rb.example | 2 +-
services/api/config/environments/test.rb.example | 5 +-
services/api/config/initializers/eventbus.rb | 38 +-
services/api/config/initializers/load_config.rb | 1 +
.../api/config/initializers/noop_deep_munge.rb | 1 +
.../config/initializers/permit_all_parameters.rb | 1 +
services/api/config/initializers/time_format.rb | 2 +
services/api/config/routes.rb | 28 +-
...0170319063406_serialized_columns_accept_null.rb | 5 +
services/api/db/structure.sql | 9 +-
services/api/lib/can_be_an_owner.rb | 2 +-
services/api/lib/create_superuser_token.rb | 4 +-
services/api/lib/eventbus.rb | 358 ----------
services/api/lib/has_uuid.rb | 14 +-
services/api/lib/load_param.rb | 2 +-
services/api/lib/serializers.rb | 6 +
.../api/lib/tasks/delete_old_container_logs.rake | 2 +-
services/api/lib/tasks/delete_old_job_logs.rake | 2 +-
services/api/lib/whitelist_update.rb | 15 +-
services/api/log/.gitkeep | 0
.../arvados/v1/collections_controller_test.rb | 6 +-
.../functional/arvados/v1/users_controller_test.rb | 1 +
.../arvados/v1/virtual_machines_controller_test.rb | 4 +-
.../test/functional/database_controller_test.rb | 2 +-
.../api_client_authorizations_scopes_test.rb | 6 +-
.../api/test/integration/crunch_dispatch_test.rb | 2 +-
.../api/test/integration/database_reset_test.rb | 2 -
services/api/test/integration/errors_test.rb | 2 +-
services/api/test/integration/pipeline_test.rb | 2 +-
.../api/test/integration/reader_tokens_test.rb | 2 +-
services/api/test/integration/websocket_test.rb | 742 ---------------------
services/api/test/test_helper.rb | 26 +-
services/api/test/unit/arvados_model_test.rb | 76 ++-
.../api/test/unit/create_superuser_token_test.rb | 2 +-
services/api/test/unit/job_test.rb | 23 +-
services/api/test/unit/user_test.rb | 12 +-
services/api/test/unit/workflow_test.rb | 8 +-
services/crunch-run/crunchrun.go | 6 +-
services/keep-web/handler.go | 4 +-
services/keepproxy/keepproxy.go | 118 ++--
services/keepproxy/keepproxy_test.go | 59 +-
services/keepproxy/proxy_client.go | 19 +
tools/keep-exercise/keep-exercise.go | 3 +-
79 files changed, 937 insertions(+), 1664 deletions(-)
create mode 100644 services/api/config/initializers/permit_all_parameters.rb
create mode 100644 services/api/db/migrate/20170319063406_serialized_columns_accept_null.rb
delete mode 100644 services/api/lib/eventbus.rb
delete mode 100644 services/api/log/.gitkeep
delete mode 100644 services/api/test/integration/websocket_test.rb
create mode 100644 services/keepproxy/proxy_client.go
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Those revisions listed above that are new to this repository have
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commit fe45b1b66c730f2546d78a7899375707c0816518
Merge: 18f3b51 ed37572
Author: Lucas Di Pentima <lucas at curoverse.com>
Date: Tue May 2 11:55:02 2017 -0300
11579: Merge branch 'master' into 11579-arvput-follow-symlinks
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