[ARVADOS] updated: fea486f94bb5cc8f51d9563eafc172b6ba2aec57

Git user git at public.curoverse.com
Mon May 1 12:43:09 EDT 2017


Summary of changes:
 sdk/cwl/arvados_cwl/crunch_script.py | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

       via  fea486f94bb5cc8f51d9563eafc172b6ba2aec57 (commit)
      from  e56ae6aad06c37d5512537047871d7363dd97620 (commit)

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commit fea486f94bb5cc8f51d9563eafc172b6ba2aec57
Author: Peter Amstutz <peter.amstutz at curoverse.com>
Date:   Mon May 1 10:36:44 2017 -0400

    Crunch script doesn't fail in file/directory literals that don't have a 'location'. refs #11549

diff --git a/sdk/cwl/arvados_cwl/crunch_script.py b/sdk/cwl/arvados_cwl/crunch_script.py
index 9ea4824..65ef508 100644
--- a/sdk/cwl/arvados_cwl/crunch_script.py
+++ b/sdk/cwl/arvados_cwl/crunch_script.py
@@ -52,7 +52,8 @@ def run():
                 return v
 
         def keeppathObj(v):
-            v["location"] = keeppath(v["location"])
+            if "location" in v:
+                v["location"] = keeppath(v["location"])
 
         for k,v in job_order_object.items():
             if isinstance(v, basestring) and arvados.util.keep_locator_pattern.match(v):

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