[ARVADOS] created: c6a8839b1888d2eeb302ddfc675772428b8895a9
Git user
git at public.curoverse.com
Thu Mar 30 10:29:46 EDT 2017
at c6a8839b1888d2eeb302ddfc675772428b8895a9 (commit)
commit c6a8839b1888d2eeb302ddfc675772428b8895a9
Author: Peter Amstutz <peter.amstutz at curoverse.com>
Date: Thu Mar 30 10:09:33 2017 -0400
11332-fix-crunchscript: Set ACCEPTLIST_RE because crunch_script alternate entry
point doesn't go through main.
diff --git a/sdk/cwl/arvados_cwl/__init__.py b/sdk/cwl/arvados_cwl/__init__.py
index 3b14701..1e10992 100644
--- a/sdk/cwl/arvados_cwl/__init__.py
+++ b/sdk/cwl/arvados_cwl/__init__.py
@@ -630,6 +630,7 @@ def arg_parser(): # type: () -> argparse.ArgumentParser
def add_arv_hints():
cache = {}
+ cwltool.draft2tool.ACCEPTLIST_RE = re.compile(r".*")
cwltool.draft2tool.ACCEPTLIST_EN_RELAXED_RE = re.compile(r".*")
res = pkg_resources.resource_stream(__name__, 'arv-cwl-schema.yml')
cache["http://arvados.org/cwl"] = res.read()
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