[ARVADOS] updated: 49a841a5179307f0c8d84f647a71f44fb2b4b26d

Git user git at public.curoverse.com
Wed Apr 12 14:45:29 EDT 2017


Summary of changes:
 doc/user/cwl/cwl-extensions.html.textile.liquid    | 17 +++++
 sdk/cwl/arvados_cwl/__init__.py                    | 28 +++----
 sdk/cwl/arvados_cwl/arv-cwl-schema.yml             | 31 ++++++++
 sdk/cwl/arvados_cwl/arvcontainer.py                |  4 +-
 sdk/cwl/arvados_cwl/crunch_script.py               |  3 +-
 sdk/cwl/arvados_cwl/pathmapper.py                  | 87 ++++++++++++----------
 sdk/cwl/setup.py                                   |  6 +-
 sdk/cwl/tests/arvados-tests.yml                    | 36 +++++++++
 sdk/cwl/tests/test_pathmapper.py                   | 25 ++++---
 sdk/cwl/tests/test_submit.py                       | 25 ++-----
 .../cwl/tests/tmp1/tmp2/tmp3}/.gitkeep             |  0
 sdk/cwl/tests/wf/listing_deep.cwl                  | 15 ++++
 sdk/cwl/tests/wf/listing_none.cwl                  | 15 ++++
 sdk/cwl/tests/wf/listing_shallow.cwl               | 15 ++++
 sdk/cwl/tests/wf/scatter2.cwl                      |  1 +
 sdk/cwl/tests/wf/scatter2_subwf.cwl                |  5 +-
 16 files changed, 223 insertions(+), 90 deletions(-)
 copy {services/api/vendor/plugins => sdk/cwl/tests/tmp1/tmp2/tmp3}/.gitkeep (100%)
 create mode 100644 sdk/cwl/tests/wf/listing_deep.cwl
 create mode 100644 sdk/cwl/tests/wf/listing_none.cwl
 create mode 100644 sdk/cwl/tests/wf/listing_shallow.cwl

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commit 49a841a5179307f0c8d84f647a71f44fb2b4b26d
Merge: cb47df6 9ea73e2
Author: Peter Amstutz <peter.amstutz at curoverse.com>
Date:   Wed Apr 12 14:45:24 2017 -0400

    Merge branch '10401-limit-dir-expansion' closes #10401


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