[ARVADOS] updated: 095872bcc3dc3bec7c3950377eb03ebab39254ba
Git user
git at public.curoverse.com
Wed Mar 23 01:58:28 EDT 2016
Summary of changes:
build/run-build-docker-jobs-image.sh | 32 +++++++++++++-------------------
sdk/cwl/arvados_cwl/__init__.py | 2 +-
sdk/cwl/tests/test_job.py | 4 ++--
sdk/go/crunchrunner/crunchrunner.go | 2 ++
services/fuse/arvados_fuse/fusefile.py | 6 ++++++
5 files changed, 24 insertions(+), 22 deletions(-)
discards 83b983aad4f2567d0fb269ee1bec677205a174a1 (commit)
discards ab214eb1e693bb4c2df1e0665f41ef49e7708da7 (commit)
via 095872bcc3dc3bec7c3950377eb03ebab39254ba (commit)
via 1950e3471f08282092c6731f9da58d83a8da77f8 (commit)
via 1b7ac33e0651087b85f8583c72325d5583b98776 (commit)
via 7bf10f8b9d2246a9144ef1322e102fe227c7362e (commit)
via 3e50cdc0ff3c5c8d40d082bf99a43eae3682aa72 (commit)
via 354ab6f297bb2100b6ebd0c94fa6463a77d18844 (commit)
via 9df4d7da24ef8be639af1ab806cf833ee544fb45 (commit)
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commit 095872bcc3dc3bec7c3950377eb03ebab39254ba
Author: Tom Clegg <tom at curoverse.com>
Date: Tue Mar 22 17:29:29 2016 -0400
8697: Move error messages from stdout to stderr.
diff --git a/sdk/cli/bin/arv-run-pipeline-instance b/sdk/cli/bin/arv-run-pipeline-instance
index 70e2f42..6dc82c5 100755
--- a/sdk/cli/bin/arv-run-pipeline-instance
+++ b/sdk/cli/bin/arv-run-pipeline-instance
@@ -17,7 +17,7 @@ begin
require 'trollop'
require 'google/api_client'
rescue LoadError => l
- puts $:
+ $stderr.puts $:
abort <<-EOS
#{$0}: fatal: #{l.message}
Some runtime dependencies may be missing.
@@ -132,7 +132,7 @@ if $options[:instance]
abort "#{$0}: syntax error: --instance cannot be combined with --template or --submit."
end
elsif not $options[:template]
- puts "error: you must supply a --template or --instance."
+ $stderr.puts "error: you must supply a --template or --instance."
p.educate
abort
end
commit 1950e3471f08282092c6731f9da58d83a8da77f8
Author: Tom Clegg <tom at curoverse.com>
Date: Tue Mar 22 17:28:39 2016 -0400
8697: Relax version constraints so gem can be used in ruby187/ree projects.
diff --git a/sdk/ruby/arvados.gemspec b/sdk/ruby/arvados.gemspec
index 3d090f4..7155ad7 100644
--- a/sdk/ruby/arvados.gemspec
+++ b/sdk/ruby/arvados.gemspec
@@ -18,13 +18,15 @@ Gem::Specification.new do |s|
s.files = ["lib/arvados.rb", "lib/arvados/google_api_client.rb",
"lib/arvados/collection.rb", "lib/arvados/keep.rb",
"README", "LICENSE-2.0.txt"]
- s.required_ruby_version = '>= 2.1.0'
+ s.required_ruby_version = '>= 1.8.7'
# activesupport <4.2.6 only because https://dev.arvados.org/issues/8222
- s.add_dependency('activesupport', '>= 3.2.13', '< 4.2.6')
+ s.add_dependency('activesupport', '>= 3', '< 4.2.6')
s.add_dependency('andand', '~> 1.3', '>= 1.3.3')
- s.add_dependency('google-api-client', '~> 0.6.3', '>= 0.6.3')
+ s.add_dependency('google-api-client', '~> 0.8', '<0.9')
+ # work around undeclared dependency on i18n in some activesupport 3.x.x:
+ s.add_dependency('i18n', '~> 0')
s.add_dependency('json', '~> 1.7', '>= 1.7.7')
- s.add_runtime_dependency('jwt', '>= 0.1.5', '< 1.0.0')
+ s.add_runtime_dependency('jwt', '<2', '>= 0.1.5')
s.homepage =
'https://arvados.org'
end
diff --git a/sdk/ruby/lib/arvados.rb b/sdk/ruby/lib/arvados.rb
index 753c518..0c6ddeb 100644
--- a/sdk/ruby/lib/arvados.rb
+++ b/sdk/ruby/lib/arvados.rb
@@ -209,7 +209,7 @@ class Arvados
:parameters => parameters,
:body_object => body,
:headers => {
- authorization: 'OAuth2 '+arvados.config['ARVADOS_API_TOKEN']
+ :authorization => 'OAuth2 '+arvados.config['ARVADOS_API_TOKEN']
})
resp = JSON.parse result.body, :symbolize_names => true
if resp[:errors]
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