[ARVADOS] updated: 933502f76e8ee71744097970597f9744c02dd09b

Git user git at public.curoverse.com
Wed Mar 2 16:29:21 EST 2016


Summary of changes:
 sdk/cwl/arvados_cwl/__init__.py | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

       via  933502f76e8ee71744097970597f9744c02dd09b (commit)
      from  274e832a7ae7bcddd3c6a98863f8b2c46597c881 (commit)

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commit 933502f76e8ee71744097970597f9744c02dd09b
Author: Peter Amstutz <peter.amstutz at curoverse.com>
Date:   Wed Mar 2 10:54:53 2016 -0500

    8488: Match line beginnings

diff --git a/sdk/cwl/arvados_cwl/__init__.py b/sdk/cwl/arvados_cwl/__init__.py
index 6429a91..0b90c78 100644
--- a/sdk/cwl/arvados_cwl/__init__.py
+++ b/sdk/cwl/arvados_cwl/__init__.py
@@ -29,9 +29,9 @@ crunchrunner_pdh = "83db29f08544e1c319572a6bd971088a+140"
 crunchrunner_download = "https://cloud.curoverse.com/collections/download/qr1hi-4zz18-n3m1yxd0vx78jic/1i1u2qtq66k1atziv4ocfgsg5nu5tj11n4r6e0bhvjg03rix4m/crunchrunner"
 certs_download = "https://cloud.curoverse.com/collections/download/qr1hi-4zz18-n3m1yxd0vx78jic/1i1u2qtq66k1atziv4ocfgsg5nu5tj11n4r6e0bhvjg03rix4m/ca-certificates.crt"
 
-tmpdirre = re.compile(r"\S+ \S+ \d+ \d+ stderr \S+ \S+ crunchrunner: \$\(task\.tmpdir\)=(.*)")
-outdirre = re.compile(r"\S+ \S+ \d+ \d+ stderr \S+ \S+ crunchrunner: \$\(task\.outdir\)=(.*)")
-keepre = re.compile(r"\S+ \S+ \d+ \d+ stderr \S+ \S+ crunchrunner: \$\(task\.keep\)=(.*)")
+tmpdirre = re.compile(r"^\S+ \S+ \d+ \d+ stderr \S+ \S+ crunchrunner: \$\(task\.tmpdir\)=(.*)")
+outdirre = re.compile(r"^\S+ \S+ \d+ \d+ stderr \S+ \S+ crunchrunner: \$\(task\.outdir\)=(.*)")
+keepre = re.compile(r"^\S+ \S+ \d+ \d+ stderr \S+ \S+ crunchrunner: \$\(task\.keep\)=(.*)")
 
 
 def arv_docker_get_image(api_client, dockerRequirement, pull_image):

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