[ARVADOS] updated: affe4f1084284a14a8f60501029bb3ea83af95d4

Git user git at public.curoverse.com
Mon Feb 29 09:13:56 EST 2016


Summary of changes:
 sdk/cwl/arvados_cwl/__init__.py | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

       via  affe4f1084284a14a8f60501029bb3ea83af95d4 (commit)
      from  9be7771ac7f946a1802c166241a222d645a31a71 (commit)

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commit affe4f1084284a14a8f60501029bb3ea83af95d4
Author: Peter Amstutz <peter.amstutz at curoverse.com>
Date:   Mon Feb 29 09:13:48 2016 -0500

    8488: Use OrderedJsonModel so that pipeline components show up in the order they were queued.

diff --git a/sdk/cwl/arvados_cwl/__init__.py b/sdk/cwl/arvados_cwl/__init__.py
index 6cfdd0b..86619d5 100644
--- a/sdk/cwl/arvados_cwl/__init__.py
+++ b/sdk/cwl/arvados_cwl/__init__.py
@@ -20,6 +20,7 @@ import os
 import sys
 
 from cwltool.process import get_feature
+from arvados.api import OrderedJsonModel
 
 logger = logging.getLogger('arvados.cwl-runner')
 logger.setLevel(logging.INFO)
@@ -398,7 +399,7 @@ def main(args, stdout, stderr, api_client=None):
                         help="")
 
     try:
-        runner = ArvCwlRunner(api_client=arvados.api('v1'))
+        runner = ArvCwlRunner(api_client=arvados.api('v1', model=OrderedJsonModel()))
     except Exception as e:
         logger.error(e)
         return 1

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