[ARVADOS] updated: 9ae893ba644bdaf67c63a812e8f8480fac24e2a8

[Git user]

Summary of changes:
 sdk/cwl/arvados_cwl/arvjob.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

       via  9ae893ba644bdaf67c63a812e8f8480fac24e2a8 (commit)
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commit 9ae893ba644bdaf67c63a812e8f8480fac24e2a8
Author: Peter Amstutz <peter.amstutz at curoverse.com>
Date:   Thu Aug 11 12:29:41 2016 -0400

    9552: Set pipeline on the runner so it will marked as completed by ArvCwlRunner.output_callback

diff --git a/sdk/cwl/arvados_cwl/arvjob.py b/sdk/cwl/arvados_cwl/arvjob.py
index 0035597..9f11058 100644
--- a/sdk/cwl/arvados_cwl/arvjob.py
+++ b/sdk/cwl/arvados_cwl/arvjob.py
@@ -227,7 +227,7 @@ class RunnerJob(Runner):
         logger.info("Submitted job %s", response["uuid"])
 
         if kwargs.get("submit"):
-            self.pipeline = self.arvrunner.api.pipeline_instances().create(
+            self.arvrunner.pipeline = self.arvrunner.api.pipeline_instances().create(
                 body={
                     "owner_uuid": self.arvrunner.project_uuid,
                     "name": shortname(self.tool.tool["id"]),

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