[ARVADOS] updated: 0969c534741180e61ac318ffe799ac3512fc19d8

git at public.curoverse.com git at public.curoverse.com
Fri Sep 4 22:37:53 EDT 2015


Summary of changes:
 doc/README.textile                                       |  2 +-
 doc/_includes/_alert-incomplete.liquid                   |  2 +-
 doc/_includes/_alert_stub.liquid                         |  2 +-
 doc/_includes/_navbar_top.liquid                         |  2 +-
 doc/index.html.liquid                                    |  8 ++++----
 doc/install/install-api-server.html.textile.liquid       |  2 +-
 doc/install/install-docker.html.textile.liquid           |  2 +-
 doc/sdk/go/index.html.textile.liquid                     |  4 ++--
 .../getting_started/firstpipeline.html.textile.liquid    |  2 +-
 doc/user/examples/crunch-examples.html.textile.liquid    | 16 ++++++++--------
 doc/user/getting_started/community.html.textile.liquid   |  4 ++--
 .../tutorial-gatk-variantfiltration.html.textile.liquid  |  2 +-
 doc/user/tutorials/intro-crunch.html.textile.liquid      |  2 +-
 .../running-external-program.html.textile.liquid         |  6 +++---
 14 files changed, 28 insertions(+), 28 deletions(-)

       via  0969c534741180e61ac318ffe799ac3512fc19d8 (commit)
      from  fb82c3a9ab31a55b708e61b183b30bd640f38c79 (commit)

Those revisions listed above that are new to this repository have
not appeared on any other notification email; so we list those
revisions in full, below.


commit 0969c534741180e61ac318ffe799ac3512fc19d8
Author: Ward Vandewege <ward at curoverse.com>
Date:   Fri Sep 4 22:37:05 2015 -0400

    Update docs to accomodate URL change for the Arvados redmine
    installation. It now lives at dev.arvados.org.
    
    refs #7187

diff --git a/doc/README.textile b/doc/README.textile
index 9d58dfe..f293614 100644
--- a/doc/README.textile
+++ b/doc/README.textile
@@ -4,7 +4,7 @@ This is the source code for "doc.arvados.org":http://doc.arvados.org.
 
 Here's how to build the HTML pages locally so you can preview your updates before you commit and push.
 
-Additional information is available on the "'Documentation' page on the Arvados wiki":https://arvados.org/projects/arvados/wiki/Documentation.
+Additional information is available on the "'Documentation' page on the Arvados wiki":https://dev.arvados.org/projects/arvados/wiki/Documentation.
 
 h2. Install dependencies
 
diff --git a/doc/_includes/_alert-incomplete.liquid b/doc/_includes/_alert-incomplete.liquid
index 972ba15..995c217 100644
--- a/doc/_includes/_alert-incomplete.liquid
+++ b/doc/_includes/_alert-incomplete.liquid
@@ -1,5 +1,5 @@
 <div class="alert alert-block alert-info">
   <button type="button" class="close" data-dismiss="alert">×</button>
   <h4>Hi!</h4>
-  <P>This section is incomplete. Please be patient with us as we fill in the blanks — or <A href="https://arvados.org/projects/arvados/wiki/Documentation#Contributing">contribute to the documentation project.</A></P>
+  <P>This section is incomplete. Please be patient with us as we fill in the blanks — or <A href="https://dev.arvados.org/projects/arvados/wiki/Documentation#Contributing">contribute to the documentation project.</A></P>
 </div>
diff --git a/doc/_includes/_alert_stub.liquid b/doc/_includes/_alert_stub.liquid
index 4cc2498..97a520b 100644
--- a/doc/_includes/_alert_stub.liquid
+++ b/doc/_includes/_alert_stub.liquid
@@ -1,5 +1,5 @@
 <div class="alert alert-block alert-info">
   <button type="button" class="close" data-dismiss="alert">×</button>
   <h4>Hi!</h4>
-  <p>This section is incomplete. Please be patient with us as we fill in the blanks — or <A href="https://arvados.org/projects/arvados/wiki/Documentation#Contributing">contribute to the documentation project.</A></p>
+  <p>This section is incomplete. Please be patient with us as we fill in the blanks — or <A href="https://dev.arvados.org/projects/arvados/wiki/Documentation#Contributing">contribute to the documentation project.</A></p>
 </div>
diff --git a/doc/_includes/_navbar_top.liquid b/doc/_includes/_navbar_top.liquid
index 6d88b2b..43cc995 100644
--- a/doc/_includes/_navbar_top.liquid
+++ b/doc/_includes/_navbar_top.liquid
@@ -16,7 +16,7 @@
         <li {% if page.navsection == 'sdk' %} class="active" {% endif %}><a href="{{ site.baseurl }}/sdk/index.html">SDKs</a></li>
         <li {% if page.navsection == 'api' %} class="active" {% endif %}><a href="{{ site.baseurl }}/api/index.html">API</a></li>
         <li {% if page.navsection == 'installguide' %} class="active" {% endif %}><a href="{{ site.baseurl }}/install/index.html">Install</a></li>
-        <li><a href="https://arvados.org/projects/arvados/" style="padding-left: 2em">arvados.org »</a></li>
+        <li><a href="https://arvados.org" style="padding-left: 2em">arvados.org »</a></li>
       </ul>
 
       <div class="pull-right" style="padding-top: 6px">
diff --git a/doc/index.html.liquid b/doc/index.html.liquid
index ca9bb5d..8cbf959 100644
--- a/doc/index.html.liquid
+++ b/doc/index.html.liquid
@@ -26,12 +26,12 @@ title: Arvados | Documentation
       <p><a href="https://arvados.org/">Arvados</a> enables you to quickly begin using cloud computing resources in your data science work. It allows you to track your methods and datasets, share them securely, and easily re-run analyses.
       </p>
       <p><strong>Communications</strong>
-      <p>Read our <a href="https://arvados.org/projects/arvados/blogs">blog updates</a> or look through our <a href="https://arvados.org/projects/arvados/activity">recent developer activity</a>.
+      <p>Read our <a href="https://dev.arvados.org/projects/arvados/blogs">blog updates</a> or look through our <a href="https://dev.arvados.org/projects/arvados/activity">recent developer activity</a>.
       </p>
       <p>Questions? Email <a href="http://lists.arvados.org/mailman/listinfo/arvados">the mailing list</a>, or chat with us on IRC: <a href="irc://irc.oftc.net:6667/#arvados">#arvados</a> @ OFTC (you can <a href="https://webchat.oftc.net/?channels=arvados">join in your browser</a>).
       </p>
       <p><strong>Want to contribute?</strong></p>
-      <p>Check out our <a href="https://arvados.org/projects/arvados">developer site</a>. We're open source, check out our code on <a href="https://github.com/curoverse/arvados">github</a>.
+      <p>Check out our <a href="https://dev.arvados.org/projects/arvados">developer site</a>. We're open source, check out our code on <a href="https://github.com/curoverse/arvados">github</a>.
       </p>
       <p><strong>License</strong></p>
       <p>Arvados is under the copyleft <a href="{{ site.baseurl }}/user/copying/agpl-3.0.html">GNU AGPL v3</a>, with our SDKs under <a href="{{ site.baseurl }}/user/copying/LICENSE-2.0.html">Apache License 2.0</a> (so that you can incorporate proprietary toolchains into your pipelines).
@@ -41,7 +41,7 @@ title: Arvados | Documentation
     <div class="col-sm-6" style="border-left: solid; border-width: 1px">
       <p><strong>Quickstart</strong> 
       <p>
-        Try any pipeline from the <a href="https://arvados.org/projects/arvados/wiki/Public_Pipelines_and_Datasets">list of public pipelines</a>. For instance, the <a href="http://curover.se/pathomap">Pathomap Pipeline</a> links to these <a href="https://arvados.org/projects/arvados/wiki/pathomap_tutorial/">step-by-step instructions</a> for trying Arvados out right in your browser using Curoverse's <a href="http://lp.curoverse.com/beta-signup/">public Arvados instance</a>.
+        Try any pipeline from the <a href="https://dev.arvados.org/projects/arvados/wiki/Public_Pipelines_and_Datasets">list of public pipelines</a>. For instance, the <a href="http://curover.se/pathomap">Pathomap Pipeline</a> links to these <a href="https://dev.arvados.org/projects/arvados/wiki/pathomap_tutorial/">step-by-step instructions</a> for trying Arvados out right in your browser using Curoverse's <a href="http://lp.curoverse.com/beta-signup/">public Arvados instance</a>.
       </p>
         <!--<p>-->
       <!--<ol>-->
@@ -60,7 +60,7 @@ title: Arvados | Documentation
         Pipeline Developer Quickstart
       </strong></p>
       <p>
-      Want to port your pipeline to Arvados? Check out the step-by-step <a href="https://arvados.org/projects/arvados/wiki/Port_a_Pipeline">Port-a-Pipeline</a> guide on the Arvados wiki.
+      Want to port your pipeline to Arvados? Check out the step-by-step <a href="https://dev.arvados.org/projects/arvados/wiki/Port_a_Pipeline">Port-a-Pipeline</a> guide on the Arvados wiki.
       </p>
       <p><strong>More in-depth guides
       </strong></p>
diff --git a/doc/install/install-api-server.html.textile.liquid b/doc/install/install-api-server.html.textile.liquid
index d2b7566..f2a518a 100644
--- a/doc/install/install-api-server.html.textile.liquid
+++ b/doc/install/install-api-server.html.textile.liquid
@@ -86,7 +86,7 @@ h2(#configure_application). Configure the API server
 
 Edit @/etc/arvados/api/application.yml@ to configure the settings described in the following sections.  The deployment script will consistently deploy this to the API server's configuration directory.  The API server reads both @application.yml@ and its own @config/application.default.yml@ file.  The settings in @application.yml@ take precedence over the defaults that are defined in @config/application.default.yml at .  The @config/application.yml.example@ file is not read by the API server and is provided as a starting template only.
 
- at config/application.default.yml@ documents additional configuration settings not listed here.  You can "view the current source version":https://arvados.org/projects/arvados/repository/revisions/master/entry/services/api/config/application.default.yml for reference.
+ at config/application.default.yml@ documents additional configuration settings not listed here.  You can "view the current source version":https://dev.arvados.org/projects/arvados/repository/revisions/master/entry/services/api/config/application.default.yml for reference.
 
 Only put local configuration in @application.yml at .  Do not edit @application.default.yml at .
 
diff --git a/doc/install/install-docker.html.textile.liquid b/doc/install/install-docker.html.textile.liquid
index 1566e80..922c329 100644
--- a/doc/install/install-docker.html.textile.liquid
+++ b/doc/install/install-docker.html.textile.liquid
@@ -24,7 +24,7 @@ h2. Download the source tree
 ~$ <span class="userinput">git clone https://github.com/curoverse/arvados.git</span>
 </code></pre></notextile>
 
-See also: "Downloading the source code":https://arvados.org/projects/arvados/wiki/Download on the Arvados wiki.
+See also: "Downloading the source code":https://dev.arvados.org/projects/arvados/wiki/Download on the Arvados wiki.
 
 h2. Building the Arvados Docker containers
 
diff --git a/doc/sdk/go/index.html.textile.liquid b/doc/sdk/go/index.html.textile.liquid
index 58446a9..2487331 100644
--- a/doc/sdk/go/index.html.textile.liquid
+++ b/doc/sdk/go/index.html.textile.liquid
@@ -14,7 +14,7 @@ You don't need to install anything. Just import the client like this. The go too
 
 <notextile>{% code 'example_sdk_go_imports' as go %}</notextile>
 
-If you need pre-release client code, you can use the latest version from the repo by following "these instructions.":https://arvados.org/projects/arvados/wiki/Go#Using-Go-with-Arvados
+If you need pre-release client code, you can use the latest version from the repo by following "these instructions.":https://dev.arvados.org/projects/arvados/wiki/Go#Using-Go-with-Arvados
 
 h3. Example
 
@@ -22,4 +22,4 @@ You can save this source as a .go file and run it:
 
 <notextile>{% code 'example_sdk_go' as go %}</notextile>
 
-A few more usage examples can be found in the "services/keepproxy":https://arvados.org/projects/arvados/repository/revisions/master/show/services/keepproxy and "sdk/go/keepclient":https://arvados.org/projects/arvados/repository/revisions/master/show/sdk/go/keepclient directories in the arvados source tree.
+A few more usage examples can be found in the "services/keepproxy":https://dev.arvados.org/projects/arvados/repository/revisions/master/show/services/keepproxy and "sdk/go/keepclient":https://dev.arvados.org/projects/arvados/repository/revisions/master/show/sdk/go/keepclient directories in the arvados source tree.
diff --git a/doc/start/getting_started/firstpipeline.html.textile.liquid b/doc/start/getting_started/firstpipeline.html.textile.liquid
index d5d7f98..8e446b5 100644
--- a/doc/start/getting_started/firstpipeline.html.textile.liquid
+++ b/doc/start/getting_started/firstpipeline.html.textile.liquid
@@ -8,7 +8,7 @@ h2. LobSTR v3
 
 In this quickstart guide, we'll run an existing pipeline with pre-existing data. Step-by-step instructions are shown below. You can follow along using your own local install or by using Curoverse's <a href="http://lp.curoverse.com/beta-signup/">hosted version of Arvados</a> (in public beta, any Google account can be used to login).
 
-(For more information about this pipeline, see our <a href="https://arvados.org/projects/arvados/wiki/LobSTR_tutorial">detailed lobSTR guide</a>).
+(For more information about this pipeline, see our <a href="https://dev.arvados.org/projects/arvados/wiki/LobSTR_tutorial">detailed lobSTR guide</a>).
 
 <div id="carousel-firstpipe" class="carousel slide" data-interval="false">
   <!-- Indicators -->
diff --git a/doc/user/examples/crunch-examples.html.textile.liquid b/doc/user/examples/crunch-examples.html.textile.liquid
index 03e9d7c..21f30cc 100644
--- a/doc/user/examples/crunch-examples.html.textile.liquid
+++ b/doc/user/examples/crunch-examples.html.textile.liquid
@@ -4,11 +4,11 @@ navsection: userguide
 title: "Scripts provided by Arvados"
 ...
 
-Several crunch scripts are included with Arvados in the "/crunch_scripts directory":https://arvados.org/projects/arvados/repository/revisions/master/show/crunch_scripts. They are intended to provide examples and starting points for writing your own scripts.
+Several crunch scripts are included with Arvados in the "/crunch_scripts directory":https://dev.arvados.org/projects/arvados/repository/revisions/master/show/crunch_scripts. They are intended to provide examples and starting points for writing your own scripts.
 
 h4. bwa-aln
 
-Run the bwa aligner on a set of paired-end fastq files, producing a BAM file for each pair. "View source.":https://arvados.org/projects/arvados/repository/revisions/master/entry/crunch_scripts/bwa-aln
+Run the bwa aligner on a set of paired-end fastq files, producing a BAM file for each pair. "View source.":https://dev.arvados.org/projects/arvados/repository/revisions/master/entry/crunch_scripts/bwa-aln
 
 <div class="offset1">
 table(table table-bordered table-condensed).
@@ -20,7 +20,7 @@ table(table table-bordered table-condensed).
 
 h4. bwa-index
 
-Generate an index of a fasta reference genome suitable for use by bwa-aln. "View source.":https://arvados.org/projects/arvados/repository/revisions/master/entry/crunch_scripts/bwa-index
+Generate an index of a fasta reference genome suitable for use by bwa-aln. "View source.":https://dev.arvados.org/projects/arvados/repository/revisions/master/entry/crunch_scripts/bwa-index
 
 <div class="offset1">
 table(table table-bordered table-condensed).
@@ -31,7 +31,7 @@ table(table table-bordered table-condensed).
 
 h4. picard-gatk2-prep
 
-Using the FixMateInformation, SortSam, ReorderSam, AddOrReplaceReadGroups, and BuildBamIndex modules from picard, prepare a BAM file for use with the GATK2 tools. Additionally, run picard's CollectAlignmentSummaryMetrics module to produce a @*.casm.tsv@ statistics file for each BAM file. "View source.":https://arvados.org/projects/arvados/repository/revisions/master/entry/crunch_scripts/picard-gatk2-prep
+Using the FixMateInformation, SortSam, ReorderSam, AddOrReplaceReadGroups, and BuildBamIndex modules from picard, prepare a BAM file for use with the GATK2 tools. Additionally, run picard's CollectAlignmentSummaryMetrics module to produce a @*.casm.tsv@ statistics file for each BAM file. "View source.":https://dev.arvados.org/projects/arvados/repository/revisions/master/entry/crunch_scripts/picard-gatk2-prep
 
 <div class="offset1">
 table(table table-bordered table-condensed).
@@ -43,7 +43,7 @@ table(table table-bordered table-condensed).
 
 h4. GATK2-realign
 
-Run GATK's RealignerTargetCreator and IndelRealigner modules on a set of BAM files. "View source.":https://arvados.org/projects/arvados/repository/revisions/master/entry/crunch_scripts/GATK2-realign
+Run GATK's RealignerTargetCreator and IndelRealigner modules on a set of BAM files. "View source.":https://dev.arvados.org/projects/arvados/repository/revisions/master/entry/crunch_scripts/GATK2-realign
 
 <div class="offset1">
 table(table table-bordered table-condensed).
@@ -59,7 +59,7 @@ table(table table-bordered table-condensed).
 
 h4. GATK2-bqsr
 
-Run GATK's BaseQualityScoreRecalibration module on a set of BAM files. "View source.":https://arvados.org/projects/arvados/repository/revisions/master/entry/crunch_scripts/GATK2-bqsr
+Run GATK's BaseQualityScoreRecalibration module on a set of BAM files. "View source.":https://dev.arvados.org/projects/arvados/repository/revisions/master/entry/crunch_scripts/GATK2-bqsr
 
 <div class="offset1">
 table(table table-bordered table-condensed).
@@ -71,7 +71,7 @@ table(table table-bordered table-condensed).
 
 h4. GATK2-merge-call
 
-Merge a set of BAM files using picard, and run GATK's UnifiedGenotyper module on the merged set to produce a VCF file. "View source.":https://arvados.org/projects/arvados/repository/revisions/master/entry/crunch_scripts/GATK2-merge-call
+Merge a set of BAM files using picard, and run GATK's UnifiedGenotyper module on the merged set to produce a VCF file. "View source.":https://dev.arvados.org/projects/arvados/repository/revisions/master/entry/crunch_scripts/GATK2-merge-call
 
 <div class="offset1">
 table(table table-bordered table-condensed).
@@ -86,7 +86,7 @@ table(table table-bordered table-condensed).
 
 h4. file-select
 
-Pass through the named files from input to output collection, and ignore the rest. "View source.":https://arvados.org/projects/arvados/repository/revisions/master/entry/crunch_scripts/file-select
+Pass through the named files from input to output collection, and ignore the rest. "View source.":https://dev.arvados.org/projects/arvados/repository/revisions/master/entry/crunch_scripts/file-select
 
 <div class="offset1">
 table(table table-bordered table-condensed).
diff --git a/doc/user/getting_started/community.html.textile.liquid b/doc/user/getting_started/community.html.textile.liquid
index 7ef903c..b18a913 100644
--- a/doc/user/getting_started/community.html.textile.liquid
+++ b/doc/user/getting_started/community.html.textile.liquid
@@ -6,7 +6,7 @@ title: Arvados Community and Getting Help
 
 h2. On the web
 
-The Arvados Free Sofware project page is located at "http://arvados.org":http://arvados.org .  The "Arvados Wiki":https://arvados.org/projects/arvados/wiki is a collaborative site for documenting Arvados and provides an overview of the Arvados Platform and Components.  The "Arvados blog":https://arvados.org/projects/arvados/blogs posts articles of interest about Arvados.
+The Arvados Free Sofware project page is located at "https://arvados.org":https://arvados.org .  The "Arvados Wiki":https://dev.arvados.org/projects/arvados/wiki is a collaborative site for documenting Arvados and provides an overview of the Arvados Platform and Components.  The "Arvados blog":https://dev.arvados.org/projects/arvados/blogs posts articles of interest about Arvados.
 
 h2. Mailing lists
 
@@ -18,4 +18,4 @@ The "#arvados":irc://irc.oftc.net:6667/#arvados IRC (Internet Relay Chat) channe
 
 h2. Bug tracking
 
-If you think you have found a bug, or would like to make a feature request, check the "Arvados issue tracker":https://arvados.org/projects/arvados/issues to see if has already been reported or "add a new issue.":https://arvados.org/projects/arvados/issues/new
+If you think you have found a bug, or would like to make a feature request, check the "Arvados issue tracker":https://dev.arvados.org/projects/arvados/issues to see if has already been reported or "add a new issue.":https://dev.arvados.org/projects/arvados/issues/new
diff --git a/doc/user/topics/tutorial-gatk-variantfiltration.html.textile.liquid b/doc/user/topics/tutorial-gatk-variantfiltration.html.textile.liquid
index bf9b242..c1c9123 100644
--- a/doc/user/topics/tutorial-gatk-variantfiltration.html.textile.liquid
+++ b/doc/user/topics/tutorial-gatk-variantfiltration.html.textile.liquid
@@ -87,7 +87,7 @@ Next, you need the GATK Resource Bundle[2].  This may already be available in Ar
 
 h2. Submit a GATK job
 
-The Arvados distribution includes an example crunch script ("crunch_scripts/GATK2-VariantFiltration":https://arvados.org/projects/arvados/repository/revisions/master/entry/crunch_scripts/GATK2-VariantFiltration) that runs the GATK VariantFiltration tool with some default settings.
+The Arvados distribution includes an example crunch script ("crunch_scripts/GATK2-VariantFiltration":https://dev.arvados.org/projects/arvados/repository/revisions/master/entry/crunch_scripts/GATK2-VariantFiltration) that runs the GATK VariantFiltration tool with some default settings.
 
 <notextile>
 <pre><code>~$ <span class="userinput">src_version=76588bfc57f33ea1b36b82ca7187f465b73b4ca4</span>
diff --git a/doc/user/tutorials/intro-crunch.html.textile.liquid b/doc/user/tutorials/intro-crunch.html.textile.liquid
index a678083..7f16c5a 100644
--- a/doc/user/tutorials/intro-crunch.html.textile.liquid
+++ b/doc/user/tutorials/intro-crunch.html.textile.liquid
@@ -21,4 +21,4 @@ To get the most value out of this section, you should be comfortable with the fo
 # Programming in Python
 # Revision control using Git
 
-We also recommend you read the "Arvados Platform Overview":https://arvados.org/projects/arvados/wiki#Platform-Overview for an introduction and background information about Arvados.
+We also recommend you read the "Arvados Platform Overview":https://dev.arvados.org/projects/arvados/wiki#Platform-Overview for an introduction and background information about Arvados.
diff --git a/doc/user/tutorials/running-external-program.html.textile.liquid b/doc/user/tutorials/running-external-program.html.textile.liquid
index accc47c..90dc197 100644
--- a/doc/user/tutorials/running-external-program.html.textile.liquid
+++ b/doc/user/tutorials/running-external-program.html.textile.liquid
@@ -24,7 +24,7 @@ This will open the template record in an interactive text editor (as specified b
 * @"repository"@, @"script_version"@, and @"script"@ indicate that we intend to use the external @"run-command"@ tool wrapper that is part of the Arvados.  These parameters are described in more detail in "Writing a script":tutorial-firstscript.html.
 * @"runtime_constraints"@ describes runtime resource requirements for the component.
 ** @"docker_image"@ specifies the "Docker":https://www.docker.com/ runtime environment in which to run the job.  The Docker image @"bcosc/arv-base-java"@ supplied here has the Java runtime environment, bwa, and samtools installed.
-** @"arvados_sdk_version"@ specifies a version of the Arvados SDK to load alongside the job's script. The example uses 'master'. If you would like to use a specific version of the sdk, you can find it in the "Arvados Python sdk repository":https://arvados.org/projects/arvados/repository/revisions/master/show/sdk/python under *Latest revisions*.
+** @"arvados_sdk_version"@ specifies a version of the Arvados SDK to load alongside the job's script. The example uses 'master'. If you would like to use a specific version of the sdk, you can find it in the "Arvados Python sdk repository":https://dev.arvados.org/projects/arvados/repository/revisions/master/show/sdk/python under *Latest revisions*.
 * @"script_parameters"@ describes the component parameters.
 ** @"command"@ is the actual command line to invoke the @bwa@ and then @SortSam at .  The notation @$()@ denotes macro substitution commands evaluated by the run-command tool wrapper.
 ** @"task.stdout"@ indicates that the output of this command should be captured to a file.
@@ -42,7 +42,7 @@ When using @run-command@, the tool should write its output to the current workin
 See the "run-command reference":{{site.baseurl}}/user/topics/run-command.html for more information about using @run-command at .
 
 *Note:* When trying to get job reproducibility without re-computation, you need to set these parameters to their specific hashes. Using a version such as master in @"arvados_sdk_version"@ will grab the latest version hash, which will allow Arvados to re-compute your job if the sdk gets updated.
-* @"arvados_sdk_version"@ : The latest version can be found on the "Arvados Python sdk repository":https://arvados.org/projects/arvados/repository/revisions/master/show/sdk/python under *Latest revisions*.
+* @"arvados_sdk_version"@ : The latest version can be found on the "Arvados Python sdk repository":https://dev.arvados.org/projects/arvados/repository/revisions/master/show/sdk/python under *Latest revisions*.
 * @"script_version"@ : The current version of your script in your git repository can be found by using the following command:
 
 <notextile>
@@ -68,7 +68,7 @@ Arvados allows users to re-use jobs that have the same inputs in order to save c
 
 Note: Job reuse can only happen if all input collections do not change.
 
-* @"arvados_sdk_version"@ : The arvados_sdk_version parameter is used to download the specific version of the Arvados sdk into the docker image. The latest version can be found in the "Arvados Python sdk repository":https://arvados.org/projects/arvados/repository/revisions/master/show/sdk/python under *Latest revisions*. Make sure you set this to the same version as the previous run that you are trying to reuse.
+* @"arvados_sdk_version"@ : The arvados_sdk_version parameter is used to download the specific version of the Arvados sdk into the docker image. The latest version can be found in the "Arvados Python sdk repository":https://dev.arvados.org/projects/arvados/repository/revisions/master/show/sdk/python under *Latest revisions*. Make sure you set this to the same version as the previous run that you are trying to reuse.
 * @"script_version"@ : The script_version is the commit hash of the git branch that the crunch script resides in. This information can be found in your git repository by using the following command:
 
 <notextile>

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