[ARVADOS] updated: 6e76e3322d66f609dabcd34c98cba34bd739e089
git at public.curoverse.com
git at public.curoverse.com
Thu Oct 29 16:35:52 EDT 2015
Summary of changes:
README | 4 +-
apps/workbench/Gemfile.lock | 15 +-
apps/workbench/app/assets/javascripts/add_group.js | 44 ++
apps/workbench/app/models/group.rb | 4 +
apps/workbench/app/models/keep_disk.rb | 2 +-
apps/workbench/app/models/keep_service.rb | 2 +-
apps/workbench/app/models/link.rb | 4 +
apps/workbench/app/models/node.rb | 2 +-
apps/workbench/app/models/user.rb | 4 +
apps/workbench/app/models/virtual_machine.rb | 7 +-
.../_getting_started_popup.html.erb | 2 +-
.../app/views/users/_add_group_modal.html.erb | 27 ++
.../workbench/app/views/users/_show_admin.html.erb | 9 +-
.../test/integration/application_layout_test.rb | 16 +-
apps/workbench/test/integration/errors_test.rb | 12 -
apps/workbench/test/integration/users_test.rb | 22 +
.../test/integration/virtual_machines_test.rb | 14 -
doc/_config.yml | 1 +
doc/_includes/_run_command_simple_example.liquid | 15 +-
doc/_includes/_ssh_addkey.liquid | 2 +-
.../_tutorial_bwa_sortsam_pipeline.liquid | 2 +-
doc/api/schema/Job.html.textile.liquid | 2 +-
doc/index.html.liquid | 2 +-
...onfigure-azure-blob-storage.html.textile.liquid | 62 +++
doc/install/install-keepstore.html.textile.liquid | 63 ++-
doc/install/install-sso.html.textile.liquid | 3 +-
.../ssh-access-unix.html.textile.liquid | 2 +-
.../ssh-access-windows.html.textile.liquid | 6 +-
.../vm-login-with-webshell.html.textile.liquid | 2 +-
doc/user/index.html.textile.liquid | 4 +-
doc/user/topics/arv-docker.html.textile.liquid | 2 +-
...tutorial-pipeline-workbench.html.textile.liquid | 6 +-
sdk/cli/bin/crunch-job | 59 ++-
sdk/go/arvadosclient/arvadosclient_test.go | 2 +-
sdk/go/arvadostest/run_servers.go | 22 +-
sdk/go/crunchrunner/crunchrunner.go | 356 +++++++++++++++++
sdk/go/crunchrunner/crunchrunner_test.go | 445 +++++++++++++++++++++
sdk/go/crunchrunner/upload.go | 217 ++++++++++
sdk/go/crunchrunner/upload_test.go | 140 +++++++
sdk/go/keepclient/keepclient.go | 46 ++-
sdk/go/keepclient/keepclient_test.go | 68 +++-
sdk/go/keepclient/support.go | 67 ++--
sdk/python/arvados/__init__.py | 65 ++-
sdk/python/arvados/api.py | 11 +
sdk/python/arvados/commands/run.py | 4 +-
sdk/python/arvados/keep.py | 33 +-
sdk/python/tests/arvados_testutil.py | 4 +
sdk/python/tests/nginx.conf | 2 +-
sdk/python/tests/run_test_server.py | 21 +-
sdk/python/tests/test_api.py | 86 ++--
sdk/python/tests/test_keep_client.py | 201 ++++++----
sdk/python/tests/test_retry_job_helpers.py | 105 +++++
services/api/Gemfile | 2 +-
services/api/config/application.yml.example | 4 +-
services/arv-git-httpd/git_handler_test.go | 6 +-
services/datamanager/datamanager_test.go | 4 +-
services/keepproxy/keepproxy.go | 14 +-
services/keepproxy/keepproxy_test.go | 127 +++++-
services/keepstore/pull_worker_integration_test.go | 2 +-
.../arvnodeman/computenode/dispatch/slurm.py | 14 +-
.../tests/test_computenode_dispatch_slurm.py | 9 +
tools/keep-rsync/keep-rsync.go | 58 +--
tools/keep-rsync/keep-rsync_test.go | 99 ++++-
63 files changed, 2312 insertions(+), 345 deletions(-)
create mode 100644 apps/workbench/app/assets/javascripts/add_group.js
create mode 100644 apps/workbench/app/views/users/_add_group_modal.html.erb
create mode 100644 doc/install/configure-azure-blob-storage.html.textile.liquid
create mode 100644 sdk/go/crunchrunner/crunchrunner.go
create mode 100644 sdk/go/crunchrunner/crunchrunner_test.go
create mode 100644 sdk/go/crunchrunner/upload.go
create mode 100644 sdk/go/crunchrunner/upload_test.go
create mode 100644 sdk/python/tests/test_retry_job_helpers.py
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Those revisions listed above that are new to this repository have
not appeared on any other notification email; so we list those
revisions in full, below.
commit 6e76e3322d66f609dabcd34c98cba34bd739e089
Merge: e3a1bf0 d70d9b2
Author: Tom Clegg <tom at curoverse.com>
Date: Thu Oct 29 16:31:37 2015 -0400
5824: Merge branch 'master' into 5824-keep-web
diff --cc doc/_config.yml
index 6d0bdb2,75cb997..2f37f5a
--- a/doc/_config.yml
+++ b/doc/_config.yml
@@@ -153,8 -153,8 +153,9 @@@ navbar
- install/install-shell-server.html.textile.liquid
- install/create-standard-objects.html.textile.liquid
- install/install-keepstore.html.textile.liquid
+ - install/configure-azure-blob-storage.html.textile.liquid
- install/install-keepproxy.html.textile.liquid
+ #- install/install-keep-web.html.textile.liquid
- install/install-crunch-dispatch.html.textile.liquid
- install/install-compute-node.html.textile.liquid
- Helpful hints:
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