[ARVADOS] updated: 1e6134579d0fd7f548a9340b67709d4731b29934
git at public.curoverse.com
git at public.curoverse.com
Wed Jul 29 12:56:58 EDT 2015
Summary of changes:
doc/user/getting_started/vm-login-with-webshell.html.textile.liquid | 2 +-
doc/user/reference/api-tokens.html.textile.liquid | 4 ++--
doc/user/topics/arv-copy.html.textile.liquid | 2 +-
doc/user/tutorials/add-new-repository.html.textile.liquid | 6 +++---
doc/user/tutorials/tutorial-submit-job.html.textile.liquid | 6 ++----
5 files changed, 9 insertions(+), 11 deletions(-)
via 1e6134579d0fd7f548a9340b67709d4731b29934 (commit)
from d22b2efd246ec82a5888d500bcbc7669654b842d (commit)
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commit 1e6134579d0fd7f548a9340b67709d4731b29934
Author: radhika <radhika at curoverse.com>
Date: Wed Jul 29 12:55:35 2015 -0400
6588: update user guide to refer to the updated user settings menu items.
diff --git a/doc/user/getting_started/vm-login-with-webshell.html.textile.liquid b/doc/user/getting_started/vm-login-with-webshell.html.textile.liquid
index bfe6686..1dd39a3 100644
--- a/doc/user/getting_started/vm-login-with-webshell.html.textile.liquid
+++ b/doc/user/getting_started/vm-login-with-webshell.html.textile.liquid
@@ -10,7 +10,7 @@ h2(#webshell). Access VM using webshell
Webshell gives you access to an arvados virtual machine from your browser with no additional setup.
-In the Arvados Workbench, click on the dropdown menu icon <span class="fa fa-lg fa-user"></span> <span class="caret"></span> in the upper right corner of the top navigation menu to access the user settings menu, and click on the menu item *Manage account* to go to the account management page. In the *Manage account* page, you will see the *Virtual Machines* panel that lists the virtual machines you can access.
+In the Arvados Workbench, click on the dropdown menu icon <span class="fa fa-lg fa-user"></span> <span class="caret"></span> in the upper right corner of the top navigation menu to access the user settings menu, and click on the menu item *My virtual machines* to see the list of virtual machines you can access.
Each row in the Virtual Machines panel lists the hostname of the VM, along with a <code>Log in as *you*</code> button under the column "Web shell beta". Clinking on this button will open up a webshell terminal for you in a new browser tab and log you in.
diff --git a/doc/user/reference/api-tokens.html.textile.liquid b/doc/user/reference/api-tokens.html.textile.liquid
index 49cdb90..4c27b60 100644
--- a/doc/user/reference/api-tokens.html.textile.liquid
+++ b/doc/user/reference/api-tokens.html.textile.liquid
@@ -10,11 +10,11 @@ Access the Arvados Workbench using this link: "{{site.arvados_workbench_host}}/"
Open a shell on the system where you want to use the Arvados client. This may be your local workstation, or an Arvados virtual machine accessed with "Webshell":{{site.baseurl}}/user/getting_started/vm-login-with-webshell.html or SSH (instructions for "Unix":{{site.baseurl}}/user/getting_started/ssh-access-unix.html#login or "Windows":{{site.baseurl}}/user/getting_started/ssh-access-windows.html#login).
-Click on the dropdown menu icon <span class="fa fa-lg fa-user"></span> <span class="caret"></span> in the upper right corner of the top navigation menu to access your account menu, then click on the menu item *Manage account* to go to the account management page. On the *Manage account* page, you will see the *Current Token* panel, which lists your current token and instructions to set up your environment.
+In the Arvados Workbench, click on the dropdown menu icon <span class="fa fa-lg fa-user"></span> <span class="caret"></span> in the upper right corner of the top navigation menu to access the user settings menu, and click on the menu item *My current token*, which lists your current token and instructions to set up your environment.
h2. Setting environment variables
-For your convenience, the *Manage account* page on Workbench provides the *Current Token* panel that includes a command you may copy and paste directly into the shell. It will look something as the following.
+The *My current token* page, accessed using the dropdown menu icon <span class="fa fa-lg fa-user"></span> <span class="caret"></span> in the upper right corner of the top navigation menu, includes a command you may copy and paste directly into the shell. It will look something as the following.
bc. HISTIGNORE=$HISTIGNORE:'export ARVADOS_API_TOKEN=*'
export ARVADOS_API_TOKEN=2jv9346o396exampledonotuseexampledonotuseexes7j1ld
diff --git a/doc/user/topics/arv-copy.html.textile.liquid b/doc/user/topics/arv-copy.html.textile.liquid
index b20b8bf..1cfd175 100644
--- a/doc/user/topics/arv-copy.html.textile.liquid
+++ b/doc/user/topics/arv-copy.html.textile.liquid
@@ -15,7 +15,7 @@ h2. arv-copy
For example, let's copy from our <a href="https://cloud.curoverse.com/">beta cloud instance *qr1hi*</a> to *dst_cluster*. The names *qr1hi* and *dst_cluster* are interchangable with any cluster name. You can find the cluster name from the prefix of the uuid of the object you want to copy. For example, in *qr1hi*-4zz18-tci4vn4fa95w0zx, the cluster name is qr1hi.
-In order for the clusters to be able to communicate with each other, you must create custom configuration files for both clusters. First, go to your *Manage account* page in Workbench and copy the @ARVADOS_API_HOST@ and @ARVADOS_API_TOKEN@ in both of your clusters. Then, create two configuration files, one for each cluster. The names of the files must have the format of *uuid_prefix.conf*. In our example, let's make two files, one for *qr1hi* and one for *dst_cluster*. From your *Manage account* page in *qr1hi* and *dst_cluster*, copy the @ARVADOS_API_HOST@ and @ARVADOS_API_TOKEN at .
+In order for the clusters to be able to communicate with each other, you must create custom configuration files for both clusters. In the Arvados Workbench, click on the dropdown menu icon <span class="fa fa-lg fa-user"></span> <span class="caret"></span> in the upper right corner of the top navigation menu to access the user settings menu, and click on the menu item *My current token*. Copy the @ARVADOS_API_HOST@ and @ARVADOS_API_TOKEN@ in both of your clusters. Then, create two configuration files, one for each cluster. The names of the files must have the format of *uuid_prefix.conf*. In our example, let's make two files, one for *qr1hi* and one for *dst_cluster*. From your *My current token* page in *qr1hi* and *dst_cluster*, copy the @ARVADOS_API_HOST@ and @ARVADOS_API_TOKEN at .
!{display: block;margin-left: 25px;margin-right: auto;}{{ site.baseurl }}/images/api-token-host.png!
diff --git a/doc/user/tutorials/add-new-repository.html.textile.liquid b/doc/user/tutorials/add-new-repository.html.textile.liquid
index 5057fda..5172cf2 100644
--- a/doc/user/tutorials/add-new-repository.html.textile.liquid
+++ b/doc/user/tutorials/add-new-repository.html.textile.liquid
@@ -19,9 +19,9 @@ Before you start using Git and arvados repositories, you should do some basic co
h2. Add "tutorial" repository
-On the Arvados Workbench, click on the dropdown menu icon <span class="fa fa-lg fa-user"></span> <span class="caret"></span> in the upper right corner of the top navigation menu to access the user settings menu, and click on the menu item *Manage account* to go to the account management page.
+On the Arvados Workbench, click on the dropdown menu icon <span class="fa fa-lg fa-user"></span> <span class="caret"></span> in the upper right corner of the top navigation menu to access the user settings menu, and click on the menu item *My repositories*.
-In the *Manage account* page, you will see the *Repositories* panel with the *Add new repository* button.
+In the *My repositories* page, you will see the *Add new repository* button.
!{display: block;margin-left: 25px;margin-right: auto;}{{ site.baseurl }}/images/repositories-panel.png!
@@ -35,7 +35,7 @@ The name you enter here must begin with a letter and can only contain alphanumer
This will create a new repository with the name @$USER/tutorial at . It can be accessed using the URL <notextile><code>https://git.{{ site.arvados_api_host }}/$USER/tutorial.git</code></notextile> or <notextile><code>git at git.{{ site.arvados_api_host }}:$USER/tutorial.git</code></notextile>
-Back in the *Repositories* panel in the *Manage account* page, you should see the @$USER/tutorial@ repository listed in the name column with these URLs.
+Back in the *My repositories* page, you should see the @$USER/tutorial@ repository listed in the name column with these URLs.
!{display: block;margin-left: 25px;margin-right: auto;}{{ site.baseurl }}/images/added-new-repository.png!
diff --git a/doc/user/tutorials/tutorial-submit-job.html.textile.liquid b/doc/user/tutorials/tutorial-submit-job.html.textile.liquid
index a772737..67d0fb9 100644
--- a/doc/user/tutorials/tutorial-submit-job.html.textile.liquid
+++ b/doc/user/tutorials/tutorial-submit-job.html.textile.liquid
@@ -22,9 +22,7 @@ All Crunch scripts are managed through the Git revision control system. Before
~$ <span class="userinput">git config --global user.email $USER at example.com</span></code></pre>
</notextile>
-On the Arvados Workbench, click on the dropdown menu icon <span class="fa fa-lg fa-user"></span> <span class="caret"></span> in the upper right corner of the top navigation menu to access the user settings menu, and click on the menu item *Manage account* to go to the account management page.
-
-On the *Manage account* page, you will see *Repositories* panel. In this panel, you should see the @$USER/tutorial@ repository listed in the *name* column. Next to *name* is the column *URL*. Copy the *URL* value associated with your repository. This should look like <notextile><code>https://git.{{ site.arvados_api_host }}/$USER/tutorial.git</code></notextile>. Alternatively, you can use <notextile><code>git at git.{{ site.arvados_api_host }}:$USER/tutorial.git</code></notextile>
+On the Arvados Workbench, click on the dropdown menu icon <span class="fa fa-lg fa-user"></span> <span class="caret"></span> in the upper right corner of the top navigation menu to access the user settings menu, and click on the menu item *My repositories*. In the *My repositories* page, you should see the @$USER/tutorial@ repository listed in the *name* column. Next to *name* is the column *URL*. Copy the *URL* value associated with your repository. This should look like <notextile><code>https://git.{{ site.arvados_api_host }}/$USER/tutorial.git</code></notextile>. Alternatively, you can use <notextile><code>git at git.{{ site.arvados_api_host }}:$USER/tutorial.git</code></notextile>
Next, on the Arvados virtual machine, clone your Git repository:
@@ -113,7 +111,7 @@ In the editor, enter the following template:
<notextile> {% code 'tutorial_submit_job' as javascript %} </notextile>
-* @"repository"@ is the name of a git repository to search for the script version. You can access a list of available git repositories on the Arvados Workbench in the *Manage account* page using the <span class="fa fa-lg fa-user"></span> <span class="caret"></span> top navigation menu icon.
+* @"repository"@ is the name of a git repository to search for the script version. You can access a list of available git repositories on the Arvados Workbench in the *My repositories* page using the <span class="fa fa-lg fa-user"></span> <span class="caret"></span> top navigation menu icon.
* @"script_version"@ specifies the version of the script that you wish to run. This can be in the form of an explicit Git revision hash, a tag, or a branch (in which case it will use the HEAD of the specified branch). Arvados logs the script version that was used in the run, enabling you to go back and re-run any past job with the guarantee that the exact same code will be used as was used in the previous run.
* @"script"@ specifies the filename of the script to run. Crunch expects to find this in the @crunch_scripts/@ subdirectory of the Git repository.
* @"runtime_constraints"@ describes the runtime environment required to run the job. These are described in the "job record schema":{{site.baseurl}}/api/schema/Job.html
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