[ARVADOS] updated: b4fd2ab4e409e36f894c1fb27144e4fa2854f389

git at public.curoverse.com git at public.curoverse.com
Thu Jan 22 08:53:26 EST 2015


Summary of changes:
 apps/workbench/Gemfile                             |  24 ++-
 apps/workbench/Gemfile.lock                        | 126 +++++++++-------
 .../app/assets/javascripts/selection.js.erb        |  50 ++++---
 .../app/controllers/application_controller.rb      |  79 +++++++---
 .../app/controllers/projects_controller.rb         |  46 ------
 .../app/controllers/repositories_controller.rb     |  12 ++
 apps/workbench/app/controllers/users_controller.rb |   1 -
 apps/workbench/app/helpers/application_helper.rb   |   6 +-
 .../app/views/application/_show_recent.html.erb    |   4 +-
 .../_show_sharing.html.erb                         |  12 +-
 apps/workbench/app/views/layouts/body.html.erb     |   7 +-
 .../views/projects/_show_contents_rows.html.erb    |   2 +-
 .../app/views/projects/_show_tab_contents.html.erb |  11 +-
 .../config/initializers/rack_mini_profile.rb       |   5 +
 apps/workbench/config/routes.rb                    |   4 +-
 .../test/controllers/projects_controller_test.rb   |  27 ++--
 .../controllers/repositories_controller_test.rb    |  44 ++++++
 apps/workbench/test/helpers/share_object_helper.rb |  78 ++++++++++
 .../test/integration/pipeline_instances_test.rb    |   3 +-
 apps/workbench/test/integration/projects_test.rb   |  76 +---------
 .../test/integration/repositories_test.rb          |  43 ++++++
 apps/workbench/test/integration/users_test.rb      |  36 +++++
 apps/workbench/test/performance/browsing_test.rb   |  15 +-
 apps/workbench/test/test_helper.rb                 |   9 +-
 doc/images/download-shared-collection.png          | Bin 0 -> 39610 bytes
 doc/images/files-uploaded.png                      | Bin 0 -> 53926 bytes
 doc/images/shared-collection.png                   | Bin 0 -> 31833 bytes
 doc/images/upload-tab-in-new-collection.png        | Bin 0 -> 77537 bytes
 doc/images/upload-using-workbench.png              | Bin 0 -> 49690 bytes
 .../tutorial-keep-get.html.textile.liquid          |  36 ++++-
 .../tutorials/tutorial-keep.html.textile.liquid    |  33 ++++-
 sdk/cli/bin/crunch-job                             |  11 +-
 sdk/python/arvados/errors.py                       |  47 +++++-
 sdk/python/arvados/events.py                       |   4 +-
 sdk/python/arvados/keep.py                         |  40 +++--
 sdk/python/tests/test_errors.py                    |  68 +++++++++
 sdk/python/tests/test_keep_client.py               |  65 +++++++++
 sdk/ruby/lib/arvados/keep.rb                       |  73 ++++++----
 services/api/Gemfile                               |   2 +-
 services/api/Gemfile.lock                          |   4 +-
 services/api/app/models/collection.rb              |  31 ++++
 .../db/migrate/20141208164553_owner_uuid_index.rb  |  16 +-
 .../20141208174553_descriptions_are_strings.rb     |  21 +++
 .../20141208174653_collection_file_names.rb        |  20 +++
 .../api/db/migrate/20141208185217_search_index.rb  |  32 ++++
 services/api/db/structure.sql                      | 161 ++++++++++++++++++++-
 .../arvados/v1/collections_controller_test.rb      |  31 ++++
 .../api/test/integration/collections_api_test.rb   |  70 +++++++++
 services/api/test/unit/arvados_model_test.rb       |  36 +++++
 services/api/test/unit/collection_test.rb          |  43 ++++++
 services/fuse/arvados_fuse/__init__.py             |   5 +-
 services/fuse/bin/arv-mount                        |   3 +-
 services/fuse/setup.py                             |   2 +-
 services/nodemanager/setup.py                      |   2 +-
 54 files changed, 1226 insertions(+), 350 deletions(-)
 rename apps/workbench/app/views/{projects => application}/_show_sharing.html.erb (88%)
 create mode 100644 apps/workbench/config/initializers/rack_mini_profile.rb
 create mode 100644 apps/workbench/test/helpers/share_object_helper.rb
 create mode 100644 apps/workbench/test/integration/repositories_test.rb
 create mode 100644 doc/images/download-shared-collection.png
 create mode 100644 doc/images/files-uploaded.png
 create mode 100644 doc/images/shared-collection.png
 create mode 100644 doc/images/upload-tab-in-new-collection.png
 create mode 100644 doc/images/upload-using-workbench.png
 create mode 100644 sdk/python/tests/test_errors.py
 create mode 100644 services/api/db/migrate/20141208174553_descriptions_are_strings.rb
 create mode 100644 services/api/db/migrate/20141208174653_collection_file_names.rb
 create mode 100644 services/api/db/migrate/20141208185217_search_index.rb

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commit b4fd2ab4e409e36f894c1fb27144e4fa2854f389
Merge: 2ab024a ffcfb73
Author: Peter Amstutz <peter.amstutz at curoverse.com>
Date:   Thu Jan 22 08:55:14 2015 -0500

    Merge branch 'master' into 4904-arv-web

commit 2ab024a39d41977cb56c699cbc0bca19b8ca3ac9
Author: Peter Amstutz <peter.amstutz at curoverse.com>
Date:   Thu Jan 22 08:55:01 2015 -0500

    Revert "4838: Add --set-executable-bit option to make all files from mounted collections be executable."
    
    This reverts commit b97ac7f96234cbbb491bdbaade840ab50802f357.

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