[ARVADOS] updated: 6c4d59cb70206b1770bd64b8db204d669cb2c55a
git at public.curoverse.com
git at public.curoverse.com
Mon Apr 13 15:16:49 EDT 2015
Summary of changes:
.../_getting_started_popup.html.erb | 121 ++++++++++++++-------
1 file changed, 84 insertions(+), 37 deletions(-)
via 6c4d59cb70206b1770bd64b8db204d669cb2c55a (commit)
from 93f6a595b7e69f955f2adee12ec512aa078cfdc9 (commit)
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commit 6c4d59cb70206b1770bd64b8db204d669cb2c55a
Author: Nancy Ouyang <nancy.ouyang at gmail.com>
Date: Mon Apr 13 15:16:45 2015 -0400
format pg 3, 4
diff --git a/apps/workbench/app/views/getting_started/_getting_started_popup.html.erb b/apps/workbench/app/views/getting_started/_getting_started_popup.html.erb
index b14f692..0df69f9 100644
--- a/apps/workbench/app/views/getting_started/_getting_started_popup.html.erb
+++ b/apps/workbench/app/views/getting_started/_getting_started_popup.html.erb
@@ -40,12 +40,12 @@ div.figure p {
What you're looking at right now is <b>Workbench</b>, the graphical interface to the Arvados system.
</p><p>
<div class="figure">
- <p> <%= image_tag "pipeline-running.gif", :class => "style_image1" %></p>
+ <p> <%= image_tag "pipeline-running.gif", :class => "style_image1" %></p> <%#Todo: shorter gif%>
<p>Running the Pathomap pipeline in Arvados.</p>
</div>
</p> <p>
- Click the <span class="btn btn-sm btn-primary">Next ></span> button below for a speed tour of Arvados.
- </p><p>
+ Click the <span class="btn-sm btn-primary">Next ></span> button below for a speed tour of Arvados.
+ </p><p style="margin-top:2em;">
<em><strong>Note:</strong> You can always come back to this Getting Started guide by clicking the <span class="fa fa-lg fa-question-circle"></span> in the upper-right corner.</em>
</p>
</div>
@@ -54,20 +54,20 @@ div.figure p {
<%#Page Two%>
<div class="modal-body" style="height: auto; overflow-y: scroll">
<div style="margin-top: -0.5em; margin-left: 0.5em;">
- <p><div style="font-size: 150%;">Don't feel like reading?</div></p>
+ <p><div style="font-size: 150%;">Take It for a Spin</div></p>
<p>
Run your first pipeline in 3 quick steps:
</p>
- <div style="display: block; margin: 0em 2em; padding-top: 1em; padding-bottom: 1em; border: thin dashed silver;">
+ <div style="display: block; margin: 0em 2em; padding-top: 1em; padding-bottom: 1em; border: thin solid silver;">
<p style="margin-left: 1em;">
- <em>First, log-in or register with any Google account if you haven't already.</em>
+ <em>First, <a href="/users/welcome">log-in or register</a> with any Google account if you haven't already.</em>
</p><p>
<ol><li> Go to the <span class="btn btn-sm btn-default"><i class="fa fa-lg fa-fw fa-dashboard"></i> Dashboard</span> > <span class="btn btn-sm btn-primary"><i class="fa fa-fw fa-gear"></i> Run a pipeline...</span>
<p style="margin-top:1em;">
<%= image_tag "mouse-move.gif", :class => "style_image2" %>
</p>
</li>
- <li> <span class="btn btn-sm btn-default"><i class="fa fa-fw fa-gear"></i>Mason Lab -- Ancestry Mapper (public)</span> > <span class="btn btn-sm btn-primary">Next: choose inputs <i class="fa fa-fw fa-arrow-circle-right"></i></span></li><br>
+ <li> <span class="btn btn-sm btn-default"><i class="fa fa-fw fa-gear"></i>Mason Lab -- Ancestry Mapper (public)</span> > <span class="btn btn-sm btn-primary">Next: choose inputs <i class="fa fa-fw fa-arrow-circle-right"></i></span></li><br>
<li> <span class="btn btn-sm btn-primary">Run <i class="fa fa-fw fa-play"></i></span></li>
</ol>
</p></div>
@@ -84,40 +84,87 @@ div.figure p {
</div>
- <div class="modal-body" style="height: 38em; overflow-y: scroll">
- <div style="margin: -0.2em 0.5em">
+ <div class="modal-body" style="height: auto; overflow-y: scroll">
+ <div style="margin-top: -0.5em; margin-left: 0.5em;">
<p><div style="font-size: 150%;">Three Useful Terms</div></p>
- * <strong>Pipeline</strong> -- A re-usable series of analysis steps.<br><br>
- ** Sometimes known as a “workflow” in other systems<br><br>
- ** A list of well-documented public pipelines can be found in the upper right corner by clicking the "?" > "Public Pipelines and Datasets"<br><br>
- ** Pro-tip: Pipeline > Jobs > Tasks. A pipeline contains jobs which contain tasks.<br><br>
- ** Pipelines can only be shared within a project<br><br>
- <br><br><br><br>
- * Collection -- Like a folder, but better<br><br>
- ** Upload data right in your browser<br><br>
- ** Better than a folder? <br><br>
- *** Collections contain the content-address of the data instead of the data itself<br><br>
- *** Sets of data can be flexibly defined and re-defined without duplicating data<br><br>
- ** Collections can be shared using the "Sharing and Permissions" > "Share" button<br><br>
- <br><br><br><br>
- * Projects -- Contain pipelines templates, pipeline instances (individual runs of a pipeline), and collections<br><br>
- ** The most useful one is your default "Home" project, under Projects > Home<br><br>
- ** Projects can be shared using the "sharing" tab<br><br>
+ <ul>
+ <li>
+ <strong>Pipeline</strong> — A re-usable series of analysis steps.
+ <ul>
+ <li>
+ Also known as a “workflow” in other systems
+ </li><li>
+ A list of well-documented public pipelines can be found in the upper right corner by clicking the <span class="fa fa-lg fa-question-circle"></span> > "Public Pipelines and Datasets"
+ </li><li>
+ Pro-tip: A Pipeline contains Jobs which contain Tasks
+ </li><li>
+ Pipelines can only be shared within a project
+ </li>
+ </ul>
+ </li>
+
+ <li>
+ <strong>Collection </strong>— Like a folder, but better.
+ <ul>
+ <li>
+ Upload data right in your browser
+ </li><li>
+ Better than a folder?
+ <ul><li>
+ Collections contain the content-address of the data instead of the data itself
+ </li><li>
+ Sets of data can be flexibly defined and re-defined without duplicating data
+ </li>
+ </ul></li><li>
+ Collections can be shared using the "Sharing and Permissions" > "Share" button
+ </li>
+ </ul>
+ </li>
+
+ <li>
+ <strong>Projects </strong>— Contain pipelines templates, pipeline instances (individual runs of a pipeline), and collections.
+ <ul><li>
+ The most useful one is your default "Home" project, under Projects > Home
+ </li><li>
+ Projects can be shared using the "sharing" tab
+ </li>
+ </ul>
+ </li>
+ </ul>
+
</div>
</div>
- <div class="modal-body" style="height: 38em; overflow-y: scroll">
- <h2>Why We Think Arvados is Awesome</h2>
- 1. Reproducible Analyses: Enough said.<br><br>
- 2. Data provenance: Every file in Arvados knows can tell you where it came from.<br><br>
- 3. Serious scaling: Need 500 GB of space? 200 compute hours? Arvados scales and parallelizes your work for you intelligently.<br><br>
- 4. Share pipelines or data: Easily publish your work the world, just like the Pathomap team did: http://www.pathomap.org/2015/04/08/run-the-pathomap-human-ancestry-pipeline-on-arvados/<br><br>
- 5. Use existing pipelines: Use best-practices pipelines on your own data with the click of a button<br><br>
- 6. Open-source: Arvados is completely open-source. Check us out at http://arvados.org/<br><br>
- <br><br><br>
- This guide and even all of Workbench is just a glimpse into the power of Arvados. Want to use the command-line instead? Or hungry to learn more? Check out our detailed documentation: http://doc.arvados.org/ (our real-time contact info is there too!)
- <br><br><br>
- That's all, folks!
+
+ <div class="modal-body" style="height: auto; overflow-y: scroll">
+ <div style="margin-top: -0.5em; margin-left: 0.5em;">
+ <p><div style="font-size: 150%;">Six Reasons Arvados is Awesome</div></p>
+ <p>
+ This guide, and in fact all of Workbench, is just a teaser for the full power of Arvados:
+ </p>
+ <ol>
+ <li>
+ <strong>Reproducible Analyses</strong>: Enough said.
+ </li><li>
+ <strong>Data provenance</strong>: Every file in Arvados knows can tell you where it came from.
+ </li><li>
+ <strong>Serious scaling</strong>: Need 500 GB of space? 200 compute hours? Arvados scales and parallelizes your work for you intelligently.
+ </li><li>
+ <strong>Share pipelines or data</strong>: Easily publish your work the world, just like <a href="http://www.pathomap.org/2015/04/08/run-the-pathomap-human-ancestry-pipeline-on-arvados/">the Pathomap team did</a>.
+ </li><li>
+ <strong>Use existing pipelines</strong>: Use best-practices pipelines on your own data with the click of a button.
+ </li><li>
+ <strong>Open-source</strong>: Arvados is completely open-source. Check out our <a href="http://arvados.org">developer site</a>.
+ </li>
+ </ol>
+ <p style="margin-top: 1em;">
+ Want to use the command-line, or hungry to learn more? Check out the User Guide at <a href="http://doc.arvados.org/">doc.arvados.org</a>.
+ </p><p>
+ Questions still? Head over to <a href="http://doc.arvados.org/">doc.arvados.org</a> to find mailing-list and contact info for the Arvados community.
+ </p><p>
+ That's all, folks! Click the "x" up top to leave this guide.
+ </p>
+ </div>
</div>
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