[ARVADOS] updated: 873226313cdc0d05a39a79a60a4fccdbf8b8c0fc
git at public.curoverse.com
git at public.curoverse.com
Mon Apr 13 12:37:54 EDT 2015
Summary of changes:
.../_getting_started_popup.html.erb | 104 ++++++++++++---------
1 file changed, 62 insertions(+), 42 deletions(-)
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from 645b161de03001fee5663397f033a2efb17bda98 (commit)
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commit 873226313cdc0d05a39a79a60a4fccdbf8b8c0fc
Author: Nancy Ouyang <nancy.ouyang at gmail.com>
Date: Mon Apr 13 12:37:50 2015 -0400
text content done; formatting needed
diff --git a/apps/workbench/app/views/getting_started/_getting_started_popup.html.erb b/apps/workbench/app/views/getting_started/_getting_started_popup.html.erb
index bf52e74..a1a7f49 100644
--- a/apps/workbench/app/views/getting_started/_getting_started_popup.html.erb
+++ b/apps/workbench/app/views/getting_started/_getting_started_popup.html.erb
@@ -5,63 +5,83 @@
</style>
<div id="getting-started-modal-window" class="modal">
- <div class="modal-dialog modal-with-loading-spinner" style="width:80%">
+ <div class="modal-dialog modal-with-loading-spinner" style="width:60%">
+ <%#<div class="modal-dialog modal-with-loading-spinner">%>
<div class="modal-content">
<div class="modal-header">
<button type="button" class="close" data-dismiss="modal" aria-hidden="true">x</button>
<div>
- <div class="col-sm-8"> <h4 class="modal-title"> Getting Started with Arvados </h4> </div>
+ <div class="col-sm-8"> <h4 class="modal-title">Getting Started with Arvados </h4> </div>
<div class="spinner spinner-32px spinner-h-center col-sm-1" hidden="true"></div>
</div>
<br/>
</div>
- <div class="modal-body" style="height: 38em; overflow-y: scroll">
-
-
-<div class="container">
- <div class="row">
- <div class="col-md-6">
- <strong>How does this work?</strong> What you're looking at right now is Workbench, the graphical interface to the Arvados system.
-<br><br>
-Click the <span class="btn btn-sm btn-primary">Next ></span> button below for a quick tour of Arvados.
-<br><br>
-<strong>OR</strong>
- <br><br>Get started by running your first pipeline in 3 quick steps:<br><br>
-<ol><li> Go to the <span class="btn btn-sm btn-default"><i class="fa fa-lg fa-fw fa-dashboard"></i> Dashboard</span> > <span class="btn btn-sm btn-primary"><i class="fa fa-fw fa-gear"></i> Run a pipeline...</span> <br><br>
-<%= image_tag "mouse-move.gif", :class => "style_image" %>.
-</li><br>
- <li> <span class="btn btn-sm btn-default"><i class="fa fa-fw fa-gear"></i>Mason Lab -- Ancestry Mapper (public)</span> > <span class="btn btn-sm btn-primary">Next: choose inputs <i class="fa fa-fw fa-arrow-circle-right"></i></span></li><br>
- <li> <span class="btn btn-sm btn-primary">Run <i class="fa fa-fw fa-play"></i></span></li>
-</ol>
- </div> <div class="col-md-6" style="border-left: solid; border-width: 1px">
- <br>
-<i class="fa fa-flag fa-flip-horizontal" style="color: green"></i> <i class="fa fa-child"></i>
-<strong>Voila!</strong> <i class="fa fa-child"></i> <i class="fa fa-flag" style="color: green"></i>
-Your pipeline is now spooling up and getting ready to run!
- <br><br>
-
- <br><br>
- Go ahead, try it for yourself right now. <span class="glyphicon glyphicon-thumbs-up"></span>
-<br><br>
-<%= image_tag "pipeline-running.gif", :class => "style_image" %>
-
- <br><br>
- <em><strong>Note:</strong> You can always come back to this Getting Started guide by clicking the <span class="fa fa-lg fa-question-circle"></span> in the upper-right corner.</em>
- <br><br>
-</div> </div> </div>
-
-
-
+ <div class="modal-body" style="height: 38em; overflow-y: scroll">
+ <h2> Welcome!</h2> <strong>How does this work?</strong>
+
+ What you're looking at right now is Workbench, the graphical interface to the Arvados system.
+ <br>For example, here's what a pipeline running in Arvados looks like:<br>
+ <%= image_tag "pipeline-running.gif", :class => "style_image" %>
+ <br><br>
+ Click the <span class="btn btn-sm btn-primary">Next ></span> button below for a speed tour of Arvados.
+ <br><br>
+ <em><strong>Note:</strong> You can always come back to this Getting Started guide by clicking the <span class="fa fa-lg fa-question-circle"></span> in the upper-right corner.</em>
+ <br><br>
</div>
+
<div class="modal-body" style="height: 38em; overflow-y: scroll">
- Page 2
+ <h2>Quickstart</h2>
+ <strong>Don't like reading manuals?</strong> Get started by running your first pipeline in 3 quick steps:<br><br>
+ <em>Tip: log-in or register with any google account if you haven't already</em>
+ <ol><li> Go to the <span class="btn btn-sm btn-default"><i class="fa fa-lg fa-fw fa-dashboard"></i> Dashboard</span> > <span class="btn btn-sm btn-primary"><i class="fa fa-fw fa-gear"></i> Run a pipeline...</span> <br><br>
+ <%= image_tag "mouse-move.gif", :class => "style_image" %><br>
+ </li>
+ <li> <span class="btn btn-sm btn-default"><i class="fa fa-fw fa-gear"></i>Mason Lab -- Ancestry Mapper (public)</span> > <span class="btn btn-sm btn-primary">Next: choose inputs <i class="fa fa-fw fa-arrow-circle-right"></i></span></li><br>
+ <li> <span class="btn btn-sm btn-primary">Run <i class="fa fa-fw fa-play"></i></span></li>
+ </ol>
+ <br>
+ <i class="fa fa-flag fa-flip-horizontal" style="color: green"></i> <i class="fa fa-child"></i>
+ <strong>Voila!</strong> <i class="fa fa-child"></i> <i class="fa fa-flag" style="color: green"></i>
+ Your pipeline is now spooling up and getting ready to run!
+ <br><br>
+ Go ahead, try it for yourself right now. <span class="glyphicon glyphicon-thumbs-up"></span>
+ <br><br>
+ Or click <span class="btn btn-sm btn-primary">Next ></span> below to keep reading!
+ <br><br>
</div>
<div class="modal-body" style="height: 38em; overflow-y: scroll">
- Page 3
+ <h2>Three Useful Terms</h2>
+ * <strong>Pipeline</strong> -- A re-usable series of analysis steps.<br><br>
+ ** Sometimes known as a “workflow” in other systems<br><br>
+ ** A list of well-documented public pipelines can be found in the upper right corner by clicking the "?" > "Public Pipelines and Datasets"<br><br>
+ ** Pro-tip: Pipeline > Jobs > Tasks. A pipeline contains jobs which contain tasks.<br><br>
+ ** Pipelines can only be shared within a project<br><br>
+ <br><br><br><br>
+ * Collection -- Like a folder, but better<br><br>
+ ** Upload data right in your browser<br><br>
+ ** Better than a folder? <br><br>
+ *** Collections contain the content-address of the data instead of the data itself<br><br>
+ *** Sets of data can be flexibly defined and re-defined without duplicating data<br><br>
+ ** Collections can be shared using the "Sharing and Permissions" > "Share" button<br><br>
+ <br><br><br><br>
+ * Projects -- Contain pipelines templates, pipeline instances (individual runs of a pipeline), and collections<br><br>
+ ** The most useful one is your default "Home" project, under Projects > Home<br><br>
+ ** Projects can be shared using the "sharing" tab<br><br>
+
</div>
<div class="modal-body" style="height: 38em; overflow-y: scroll">
- Page 4
+ 1. Reproducible Analyses: Enough said.<br><br>
+ 2. Data provenance: Every file in Arvados knows can tell you where it came from.<br><br>
+ 3. Serious scaling: Need 500 GB of space? 200 compute hours? Arvados scales and parallelizes your work for you intelligently.<br><br>
+ 4. Share pipelines or data: Easily publish your work the world, just like the Pathomap team did: http://www.pathomap.org/2015/04/08/run-the-pathomap-human-ancestry-pipeline-on-arvados/<br><br>
+ 5. Use existing pipelines: Use best-practices pipelines on your own data with the click of a button<br><br>
+ 6. Open-source: Arvados is completely open-source. Check us out at http://arvados.org/<br><br>
+ <br><br><br>
+ This guide and even all of Workbench is just a glimpse into the power of Arvados. Want to use the command-line instead? Or hungry to learn more? Check out our detailed documentation: http://doc.arvados.org/ (our real-time contact info is there too!)
+ <br><br><br>
+ That's all, folks!
+
</div>
<div class="modal-footer">
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