[ARVADOS] updated: 50efff371741949e377f8f9c11b724b1981f373a
git at public.curoverse.com
git at public.curoverse.com
Fri Oct 31 14:38:07 EDT 2014
Summary of changes:
.../workbench/app/assets/javascripts/filterable.js | 51 ++++++++
.../app/assets/javascripts/selection.js.erb | 2 +-
.../app/controllers/projects_controller.rb | 35 +++++-
apps/workbench/app/models/pipeline_instance.rb | 6 +-
.../app/views/collections/_show_files.html.erb | 59 +++++----
.../projects/_show_jobs_and_pipelines.html.erb | 1 +
.../app/views/projects/_show_tab_contents.html.erb | 2 +-
apps/workbench/config/application.yml.example | 9 ++
.../workbench/test/integration/collections_test.rb | 133 ++++++++++++++++++---
apps/workbench/test/integration/projects_test.rb | 2 +-
apps/workbench/test/unit/pipeline_instance_test.rb | 42 +++++--
.../controllers/arvados/v1/groups_controller.rb | 2 +-
services/api/config/application.yml.example | 1 +
services/api/test/fixtures/groups.yml | 4 +-
services/api/test/fixtures/jobs.yml | 10 +-
services/api/test/fixtures/pipeline_instances.yml | 4 +-
services/fuse/tests/test_mount.py | 2 +
services/nodemanager/arvnodeman/jobqueue.py | 2 +-
services/nodemanager/tests/test_computenode.py | 3 +-
services/nodemanager/tests/test_jobqueue.py | 5 +
20 files changed, 298 insertions(+), 77 deletions(-)
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commit 50efff371741949e377f8f9c11b724b1981f373a
Author: Tim Pierce <twp at curoverse.com>
Date: Thu Oct 30 10:22:02 2014 -0400
4088: use filterable.js to filter on client side
Implemented client-side filtering via filterable.js:
* Designated filename rows as "filterable"
* Designated filename pattern input field as "filterable-control"
* Added "Select all" and "Unselect all" buttons with matching
select_all_files() and unselect_all_files() actions
* Limit selection actions (compare, move, copy etc) to visible page
elements only.
* Added integration tests "Filtering collection files by regexp" and
"Creating collection from list of filtered files".
diff --git a/apps/workbench/app/assets/javascripts/selection.js.erb b/apps/workbench/app/assets/javascripts/selection.js.erb
index 59e6425..ca4dce3 100644
--- a/apps/workbench/app/assets/javascripts/selection.js.erb
+++ b/apps/workbench/app/assets/javascripts/selection.js.erb
@@ -183,7 +183,7 @@ function dispatch_selection_action() {
}
$(this).
closest('.selection-action-container').
- find(':checkbox:checked').
+ find(':checkbox:checked:visible').
each(function() {
data.push({name: param_name, value: $(this).val()});
});
diff --git a/apps/workbench/app/views/collections/_show_files.html.erb b/apps/workbench/app/views/collections/_show_files.html.erb
index 9cd77b0..6f26bda 100644
--- a/apps/workbench/app/views/collections/_show_files.html.erb
+++ b/apps/workbench/app/views/collections/_show_files.html.erb
@@ -1,3 +1,24 @@
+<script>
+// The "each" loop in select_all_files() and unselect_all_files()
+// is needed because .trigger("change") does not play well with clippy.
+// Once clippy has been retired, we should be able to compress this
+// into .filter(":visible").prop("checked", true).trigger("change").
+//
+function select_all_files() {
+ $("#collection_files :checkbox").filter(":visible").each(
+ function() {
+ $(this).prop("checked", true).trigger("change");
+ });
+}
+
+function unselect_all_files() {
+ $("#collection_files :checkbox").filter(":visible").each(
+ function() {
+ $(this).prop("checked", false).trigger("change");
+ });
+}
+</script>
+
<div class="selection-action-container" style="padding-left: 1em">
<% if !defined? no_checkboxes or !no_checkboxes %>
<div class="row">
@@ -15,50 +36,24 @@
'data-toggle' => 'dropdown'
%></li>
</ul>
+ <button id="select-all" type="button" class="btn btn-default" onClick="select_all_files()">Select all</button>
+ <button id="unselect-all" type="button" class="btn btn-default" onClick="unselect_all_files()">Unselect all</button>
</div>
</div>
- <div class="pull-right col-lg-3">
- <%= form_tag collection_path(@object.uuid), {method: 'get'} do %>
- <div class="input-group">
- <input class="form-control" id="file_regex" name="file_regex" placeholder="regular expression" value="<%= params[:file_regex] %>" type="text"/>
- <span class="input-group-btn">
- <button id="file_regex_submit" type="submit" class="btn btn-primary" autofocus>Filter</button>
- </span>
- </div>
- <% end %>
+ <div class="pull-right">
+ <input class="form-control filterable-control" data-filterable-target="ul#collection_files" id="file_regex" name="file_regex" placeholder="filename filter" type="text"/>
</div>
</div>
<p/>
<% end %>
-<% file_regex = nil %>
-<% if params[:file_regex] %>
- <% begin %>
- <% file_regex = Regexp.new(params[:file_regex]) %>
- <% rescue RegexpError %>
- <% # If the pattern is not a valid regex, quote it %>
- <% # (i.e. use it as a simple substring search) %>
- <div class="alert alert-info">
- <p>The search term <code><%= params[:file_regex] %></code> could not be parsed as a regular expression.</p>
- <p>Searching for files named <code><%= params[:file_regex] %></code> instead.</p>
- </div>
- <% file_regex = Regexp.new(Regexp.quote(params[:file_regex])) %>
- <% end %>
-<% end %>
-
<% file_tree = @object.andand.files_tree %>
<% if file_tree.nil? or file_tree.empty? %>
<p>This collection is empty.</p>
<% else %>
<ul id="collection_files" class="collection_files">
<% dirstack = [file_tree.first.first] %>
- <% file_tree.reject { |(dirname, filename, size)|
- # Eliminate any files that don't match file_regex
- # (or accept all files if no file_regex was given)
- size and file_regex and !file_regex.match(filename)
- }
- .take(10000)
- .each_with_index do |(dirname, filename, size), index| %>
+ <% file_tree.take(10000).each_with_index do |(dirname, filename, size), index| %>
<% file_path = CollectionsHelper::file_path([dirname, filename]) %>
<% while dirstack.any? and (dirstack.last != dirname) %>
<% dirstack.pop %></ul></li>
@@ -73,7 +68,7 @@
<% else %>
<% link_params = {controller: 'collections', action: 'show_file',
uuid: @object.portable_data_hash, file: file_path, size: size} %>
- <div class="collection_files_row">
+ <div class="collection_files_row filterable">
<div class="collection_files_buttons pull-right">
<%= raw(human_readable_bytes_html(size)) %>
<% disable_search = (Rails.configuration.filename_suffixes_with_view_icon.include? file_path.split('.')[-1]) ? false : true %>
diff --git a/apps/workbench/test/integration/collections_test.rb b/apps/workbench/test/integration/collections_test.rb
index 3abbf6f..68ab0ab 100644
--- a/apps/workbench/test/integration/collections_test.rb
+++ b/apps/workbench/test/integration/collections_test.rb
@@ -202,26 +202,26 @@ class CollectionsTest < ActionDispatch::IntegrationTest
end
test "Filtering collection files by regexp" do
+ headless = Headless.new
+ headless.start
+ Capybara.current_driver = :selenium
col = api_fixture('collections', 'multilevel_collection_1')
visit page_with_token('active', "/collections/#{col['uuid']}")
- # Test when only some files match the regex
+ # Filter file list to some but not all files in the collection
page.find_field('file_regex').set('file[12]')
- find('button#file_regex_submit').click
assert page.has_text?("file1")
assert page.has_text?("file2")
assert page.has_no_text?("file3")
- # Test all files matching the regex
- page.find_field('file_regex').set('file[123]')
- find('button#file_regex_submit').click
+ # Filter file list with a regex matching all files
+ page.find_field('file_regex').set('.*')
assert page.has_text?("file1")
assert page.has_text?("file2")
assert page.has_text?("file3")
- # Test no files matching the regex
+ # Filter file list to a regex matching no files
page.find_field('file_regex').set('file9')
- find('button#file_regex_submit').click
assert page.has_no_text?("file1")
assert page.has_no_text?("file2")
assert page.has_no_text?("file3")
@@ -230,13 +230,118 @@ class CollectionsTest < ActionDispatch::IntegrationTest
assert page.has_text?("multilevel_collection_1")
assert page.has_text?(col['portable_data_hash'])
- # Syntactically invalid regex
- # Page loads, but does not match any files
+ # Set filename filter to a syntactically invalid regex
+ # Page loads, but stops filtering after the last valid regex parse
page.find_field('file_regex').set('file[2')
- find('button#file_regex_submit').click
- assert page.has_text?('could not be parsed as a regular expression')
- assert page.has_no_text?("file1")
- assert page.has_no_text?("file2")
- assert page.has_no_text?("file3")
+ assert page.has_text?("multilevel_collection_1")
+ assert page.has_text?(col['portable_data_hash'])
+ assert page.has_text?("file1")
+ assert page.has_text?("file2")
+ assert page.has_text?("file3")
+
+ # Test the "Select all" button
+
+ # Note: calling .set('') on a Selenium element is not sufficient
+ # to reset the field for this test, as it does not send any key
+ # events to the browser. To clear the field, we must instead send
+ # a backspace character.
+ # See https://selenium.googlecode.com/svn/trunk/docs/api/rb/Selenium/WebDriver/Element.html#clear-instance_method
+ page.find_field('file_regex').set("\b") # backspace
+ find('button#select-all').click
+ page.all('input[type=checkbox]').each do |checkbox|
+ assert checkbox.checked?
+ end
+
+ # Test the "Unselect all" button
+ page.find_field('file_regex').set("\b") # backspace
+ find('button#unselect-all').click
+ page.all('input[type=checkbox]').each do |checkbox|
+ refute checkbox.checked?
+ end
+
+ # Filter files, then "select all", then unfilter
+ page.find_field('file_regex').set("\b") # backspace
+ find('button#unselect-all').click
+ page.find_field('file_regex').set('file[12]')
+ find('button#select-all').click
+ page.find_field('file_regex').set("\b") # backspace
+
+ # all "file1" and "file2" checkboxes must be selected
+ # all "file3" checkboxes must be clear
+ assert page.has_selector?('[value*="file1"]')
+ page.all('[value*="file1"]').each do |checkbox|
+ assert checkbox.checked?, 'checkboxes for file1 should be selected after filtering'
+ end
+ assert page.has_selector?('[value*="file2"]')
+ page.all('[value*="file2"]').each do |checkbox|
+ assert checkbox.checked?, 'checkboxes for file2 should be selected after filtering'
+ end
+ assert page.has_selector?('[value*="file3"]')
+ page.all('[value*="file3"]').each do |checkbox|
+ refute checkbox.checked?, 'checkboxes for file3 should be clear after filtering'
+ end
+
+ # Select all files, then filter, then "unselect all", then unfilter
+ page.find_field('file_regex').set("\b") # backspace
+ find('button#select-all').click
+ page.find_field('file_regex').set('file[12]')
+ find('button#unselect-all').click
+ page.find_field('file_regex').set("\b") # backspace
+
+ # all "file1" and "file2" checkboxes must be clear
+ # all "file3" checkboxes must be selected
+ assert page.has_selector?('[value*="file1"]')
+ page.all('[value*="file1"]').each do |checkbox|
+ refute checkbox.checked?, 'checkboxes for file1 should be clear after filtering'
+ end
+ assert page.has_selector?('[value*="file2"]')
+ page.all('[value*="file2"]').each do |checkbox|
+ refute checkbox.checked?, 'checkboxes for file2 should be clear after filtering'
+ end
+ assert page.has_selector?('[value*="file3"]')
+ page.all('[value*="file3"]').each do |checkbox|
+ assert checkbox.checked?, 'checkboxes for file3 should be selected after filtering'
+ end
+ end
+
+ test "Creating collection from list of filtered files" do
+ headless = Headless.new
+ headless.start
+ Capybara.current_driver = :selenium
+
+ col = api_fixture('collections', 'collection_with_files_in_subdir')
+ visit page_with_token('user1_with_load', "/collections/#{col['uuid']}")
+ assert page.has_text?('file_in_subdir1'), 'expected file_in_subdir1 not found'
+ assert page.has_text?('file1_in_subdir3'), 'expected file1_in_subdir3 not found'
+ assert page.has_text?('file2_in_subdir3'), 'expected file2_in_subdir3 not found'
+ assert page.has_text?('file1_in_subdir4'), 'expected file1_in_subdir4 not found'
+ assert page.has_text?('file2_in_subdir4'), 'expected file2_in_subdir4 not found'
+
+ # Select all files but then filter them to files in subdir1, subdir2 or subdir3
+ find('button#select-all').click
+ page.find_field('file_regex').set('_in_subdir[123]')
+ assert page.has_text?('file_in_subdir1'), 'expected file_in_subdir1 not in filtered files'
+ assert page.has_text?('file1_in_subdir3'), 'expected file1_in_subdir3 not in filtered files'
+ assert page.has_text?('file2_in_subdir3'), 'expected file2_in_subdir3 not in filtered files'
+ refute page.has_text?('file1_in_subdir4'), 'file1_in_subdir4 found in filtered files'
+ refute page.has_text?('file2_in_subdir4'), 'file2_in_subdir4 found in filtered files'
+
+ # Create a new collection
+ click_button 'Selection...'
+ within('.selection-action-container') do
+ click_link 'Create new collection with selected files'
+ end
+
+ # now in the newly created collection page
+ assert page.has_text?('Content hash:'), 'not on new collection page'
+ refute page.has_text?(col['uuid']), 'new collection page has old collection uuid'
+ refute page.has_text?(col['portable_data_hash']), 'new collection page has old portable_data_hash'
+
+ # must have files in subdir1 and subdir3 but not subdir4
+ assert page.has_text?('file_in_subdir1'), 'file_in_subdir1 missing from new collection'
+ assert page.has_text?('file1_in_subdir3'), 'file1_in_subdir3 missing from new collection'
+ assert page.has_text?('file2_in_subdir3'), 'file2_in_subdir3 missing from new collection'
+ refute page.has_text?('file1_in_subdir4'), 'file1_in_subdir4 found in new collection'
+ refute page.has_text?('file2_in_subdir4'), 'file2_in_subdir4 found in new collection'
end
end
commit 540680b267cb67d5128fbf9fc2666bdf864a0801
Author: Tom Clegg <tom at curoverse.com>
Date: Thu Oct 30 13:43:34 2014 -0400
4088: Add usage docs to filterable.js
diff --git a/apps/workbench/app/assets/javascripts/filterable.js b/apps/workbench/app/assets/javascripts/filterable.js
index d14551c..8ac1953 100644
--- a/apps/workbench/app/assets/javascripts/filterable.js
+++ b/apps/workbench/app/assets/javascripts/filterable.js
@@ -1,3 +1,54 @@
+// filterable.js shows/hides content when the user operates
+// search/select widgets. For "infinite scroll" content, it passes the
+// filters to the server and retrieves new content. For other content,
+// it filters the existing DOM elements using jQuery show/hide.
+//
+// Usage:
+//
+// 1. Add the "filterable" class to each filterable content item.
+// Typically, each item is a 'tr' or a 'div class="row"'.
+//
+// <div id="results">
+// <div class="filterable row">First row</div>
+// <div class="filterable row">Second row</div>
+// </div>
+//
+// 2. Add the "filterable-control" class to each search/select widget.
+// Also add a data-filterable-target attribute with a jQuery selector
+// for an ancestor of the filterable items, i.e., the container in
+// which this widget should apply filtering.
+//
+// <input class="filterable-control" data-filterable-target="#results"
+// type="text" />
+//
+// Supported widgets:
+//
+// <input type="text" ... />
+//
+// The input value is used as a regular expression. Rows with content
+// matching the regular expression are shown.
+//
+// <select ... data-filterable-attribute="data-example-attr">
+// <option value="foo">Foo</option>
+// <option value="">Show all</option>
+// </select>
+//
+// When the user selects the "Foo" option, rows with
+// data-example-attr="foo" are shown, and all others are hidden. When
+// the user selects the "Show all" option, all rows are shown.
+//
+// Notes:
+//
+// When multiple filterable-control widgets operate on the same
+// data-filterable-target, items must pass _all_ filters in order to
+// be shown.
+//
+// If one data-filterable-target is the parent of another
+// data-filterable-target, results are undefined. Don't do this.
+//
+// Combining "select" filterable-controls with infinite-scroll is not
+// yet supported.
+
$(document).
on('paste keyup input', 'input[type=text].filterable-control', function() {
var $target = $($(this).attr('data-filterable-target'));
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