[ARVADOS] updated: 358045151388f4c5d4078a96e1391b7f02e4ce88

git at public.curoverse.com git at public.curoverse.com
Thu Oct 23 17:59:55 EDT 2014


Summary of changes:
 .../app/controllers/actions_controller.rb          |   2 +-
 .../workbench/test/integration/collections_test.rb |  29 ++++++++++++++++++++-
 doc/images/workbench-dashboard.png                 | Bin 44822 -> 94257 bytes
 ...tutorial-pipeline-workbench.html.textile.liquid |   2 +-
 services/api/test/fixtures/collections.yml         |  12 +++++++++
 5 files changed, 42 insertions(+), 3 deletions(-)

       via  358045151388f4c5d4078a96e1391b7f02e4ce88 (commit)
       via  22db612b913e6b4d68b3600c04d06e4898a2f1a9 (commit)
       via  fcfd4428e2889ceb847b64b0819207c421de1abd (commit)
       via  7149ee5d616b932a73fb7a311136e6db75020666 (commit)
       via  a124a5350d31001a7c66381fa853dfcd78dddd06 (commit)
       via  3ca013aedeae5b2085b8fb37ca80501117f0f918 (commit)
       via  3bf2514da60ab2e0b7639959b650cc4d93784080 (commit)
       via  f2ba19f987bfe7de245176e9fb4ea5e783564494 (commit)
      from  ae4948ee3a6e2d55a44a31272d1f67b669b0345f (commit)

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commit 358045151388f4c5d4078a96e1391b7f02e4ce88
Author: radhika <radhika at curoverse.com>
Date:   Thu Oct 23 17:59:04 2014 -0400

    4195: update workbench dashboard pic

diff --git a/doc/images/workbench-dashboard.png b/doc/images/workbench-dashboard.png
index d8dec0e..76df32c 100644
Binary files a/doc/images/workbench-dashboard.png and b/doc/images/workbench-dashboard.png differ
diff --git a/doc/user/tutorials/tutorial-pipeline-workbench.html.textile.liquid b/doc/user/tutorials/tutorial-pipeline-workbench.html.textile.liquid
index 9373c9b..3640880 100644
--- a/doc/user/tutorials/tutorial-pipeline-workbench.html.textile.liquid
+++ b/doc/user/tutorials/tutorial-pipeline-workbench.html.textile.liquid
@@ -22,7 +22,7 @@ notextile. <div class="spaced-out">
 # Once again, open the *All projects <span class="caret"></span>* menu and select *<i class="fa fa-fw fa-share-alt"></i> Arvados Tutorial*.  Select *<i class="fa fa-fw fa-archive"></i> Tutorial chromosome 19 reference* and click the <span class="btn btn-sm btn-primary" >OK</span> button.
 # Repeat the previous two steps to set the *Input genome (fastq)* parameter to *<i class="fa fa-fw fa-archive"></i> Tutorial sample exome*.
 # Click on the <span class="btn btn-sm btn-primary" >Run <i class="fa fa-fw fa-play"></i></span> button.  The page updates to show you that the pipeline has been submitted to run on the Arvados cluster.
-# After the pipeline starts running, you can track the progress by watching log messages from jobs.  This page refreshes automatically.  You will see a <span class="label label-success">success</span> label under the *job* the column when the pipeline completes successfully.
+# After the pipeline starts running, you can track the progress by watching log messages from jobs.  This page refreshes automatically.  You will see a <span class="label label-success">complete</span> label under the *job* column when the pipeline completes successfully.
 # Click on the *Output* link to see the results of the job.  This will load a new page listing the output files from this pipeline.  You'll see the output SAM file from the alignment tool under the *Files* tab.
 # Click on the <span class="btn btn-sm btn-info"><i class="fa fa-download"></i></span> download button to the right of the SAM file to download your results.
 

commit 22db612b913e6b4d68b3600c04d06e4898a2f1a9
Merge: ae4948e fcfd442
Author: radhika <radhika at curoverse.com>
Date:   Thu Oct 23 17:24:29 2014 -0400

    Merge branch 'master' into 4195-pipeline-tutorial


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