[ARVADOS] updated: 06e402b11ad4d503feb5fa45845cb27c93478cfc
git at public.curoverse.com
git at public.curoverse.com
Thu Nov 13 10:12:19 EST 2014
Summary of changes:
.../app/controllers/application_controller.rb | 1 +
.../app/controllers/collections_controller.rb | 39 +--
apps/workbench/app/controllers/users_controller.rb | 6 +-
apps/workbench/app/models/arvados_api_client.rb | 7 +-
apps/workbench/app/models/arvados_base.rb | 4 +-
apps/workbench/app/models/arvados_resource_list.rb | 163 ++++++----
.../app/views/application/_paging.html.erb | 22 +-
.../app/views/collections/_choose_rows.html.erb | 18 +-
.../app/views/collections/_index_tbody.html.erb | 2 +-
.../app/views/collections/_show_recent.html.erb | 4 +-
.../app/views/projects/_show_sharing.html.erb | 3 +-
.../views/users/_manage_virtual_machines.html.erb | 2 +
.../workbench/app/views/users/_show_admin.html.erb | 2 +-
.../test/unit/arvados_resource_list_test.rb | 97 ++++--
crunch_scripts/run-command | 5 +-
doc/_config.yml | 2 +
doc/api/schema/Job.html.textile.liquid | 13 +-
doc/sdk/cli/index.html.textile.liquid | 53 +---
doc/sdk/cli/install.html.textile.liquid | 42 +++
doc/sdk/cli/subcommands.html.textile.liquid | 252 +++++++++++++++
sdk/cli/bin/arv | 8 +-
sdk/cli/bin/arv-tag | 15 +-
sdk/go/keepclient/keepclient.go | 22 +-
sdk/go/keepclient/keepclient_test.go | 114 ++++---
sdk/go/keepclient/root_sorter.go | 57 ++++
sdk/go/keepclient/root_sorter_test.go | 58 ++++
sdk/go/keepclient/support.go | 65 +---
sdk/python/arvados/arvfile.py | 29 ++
sdk/python/arvados/collection.py | 111 +++++--
sdk/python/arvados/keep.py | 198 ++++++------
sdk/python/arvados/retry.py | 10 +-
sdk/python/arvados/stream.py | 121 ++++---
sdk/python/arvados/util.py | 4 +-
sdk/python/setup.py | 1 +
sdk/python/tests/arvados_testutil.py | 42 +++
sdk/python/tests/run_test_server.py | 14 +-
sdk/python/tests/test_collections.py | 287 +++++++----------
sdk/python/tests/test_keep_client.py | 169 +++++++++-
sdk/python/tests/test_retry.py | 4 +-
sdk/python/tests/test_stream.py | 174 +++++++++-
services/api/app/models/job.rb | 59 ++--
...141111133038_add_arvados_sdk_version_to_jobs.rb | 13 +
services/api/db/structure.sql | 7 +-
services/api/lib/load_param.rb | 7 +-
services/api/test/fixtures/keep_services.yml | 6 +-
services/api/test/fixtures/links.yml | 14 +
services/api/test/fixtures/repositories.yml | 5 +
.../arvados/v1/commits_controller_test.rb | 3 +-
.../arvados/v1/groups_controller_test.rb | 67 ++--
.../arvados/v1/repositories_controller_test.rb | 15 +-
services/api/test/helpers/git_test_helper.rb | 4 +-
services/api/test/integration/keep_proxy_test.rb | 17 +-
services/api/test/test.git.tar | Bin 153600 -> 194560 bytes
services/api/test/unit/job_test.rb | 84 ++++-
services/keepproxy/keepproxy_test.go | 14 +-
.../nodemanager/arvnodeman/computenode/__init__.py | 353 ---------------------
.../computenode/{ => dispatch}/__init__.py | 123 +------
.../arvnodeman/computenode/driver/__init__.py | 64 ++++
.../arvnodeman/computenode/{ => driver}/dummy.py | 3 +-
.../arvnodeman/computenode/{ => driver}/ec2.py | 3 +-
services/nodemanager/arvnodeman/config.py | 5 +-
services/nodemanager/arvnodeman/daemon.py | 13 +-
services/nodemanager/arvnodeman/jobqueue.py | 10 +-
services/nodemanager/arvnodeman/launcher.py | 12 +-
services/nodemanager/doc/ec2.example.cfg | 4 +
services/nodemanager/doc/local.example.cfg | 1 +
services/nodemanager/tests/test_computenode.py | 279 ----------------
...computenode.py => test_computenode_dispatch.py} | 35 +-
...enode_ec2.py => test_computenode_driver_ec2.py} | 2 +-
services/nodemanager/tests/test_daemon.py | 17 +-
services/nodemanager/tests/test_jobqueue.py | 18 ++
71 files changed, 1877 insertions(+), 1620 deletions(-)
create mode 100644 doc/sdk/cli/install.html.textile.liquid
create mode 100644 doc/sdk/cli/subcommands.html.textile.liquid
create mode 100644 sdk/go/keepclient/root_sorter.go
create mode 100644 sdk/go/keepclient/root_sorter_test.go
create mode 100644 sdk/python/arvados/arvfile.py
create mode 100644 services/api/db/migrate/20141111133038_add_arvados_sdk_version_to_jobs.rb
copy services/nodemanager/arvnodeman/computenode/{ => dispatch}/__init__.py (69%)
create mode 100644 services/nodemanager/arvnodeman/computenode/driver/__init__.py
rename services/nodemanager/arvnodeman/computenode/{ => driver}/dummy.py (96%)
rename services/nodemanager/arvnodeman/computenode/{ => driver}/ec2.py (98%)
copy services/nodemanager/tests/{test_computenode.py => test_computenode_dispatch.py} (89%)
rename services/nodemanager/tests/{test_computenode_ec2.py => test_computenode_driver_ec2.py} (98%)
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