[ARVADOS] updated: c8060b94c485d5bf0e500d2321793cd56db4c856
git at public.curoverse.com
git at public.curoverse.com
Tue Mar 11 10:12:06 EDT 2014
Summary of changes:
apps/workbench/.gitignore | 1 +
apps/workbench/Gemfile | 3 +-
apps/workbench/Gemfile.lock | 2 +
.../app/assets/javascripts/application.js | 3 +-
apps/workbench/app/assets/javascripts/editable.js | 17 ++-
.../app/assets/javascripts/pipeline_instances.js | 46 ++++++
.../javascripts/pipeline_instances.js.coffee | 3 -
apps/workbench/app/assets/javascripts/selection.js | 172 ++++++++++++++++++++
apps/workbench/app/assets/javascripts/sizing.js | 4 +-
.../app/assets/stylesheets/application.css.scss | 11 ++-
.../assets/stylesheets/pipeline_templates.css.scss | 27 +++
.../workbench/app/assets/stylesheets/selection.css | 29 ++++
.../app/controllers/actions_controller.rb | 99 +++++++++++
.../app/controllers/application_controller.rb | 2 +
.../app/controllers/collections_controller.rb | 12 ++-
apps/workbench/app/controllers/jobs_controller.rb | 5 +-
.../app/controllers/keep_disks_controller.rb | 5 +
.../controllers/pipeline_instances_controller.rb | 48 ++++++
.../controllers/pipeline_templates_controller.rb | 13 ++
apps/workbench/app/controllers/users_controller.rb | 18 ++
apps/workbench/app/helpers/application_helper.rb | 125 ++++++++++++++-
apps/workbench/app/helpers/collections_helper.rb | 4 +
.../app/helpers/pipeline_instances_helper.rb | 53 +++----
.../app/helpers/pipeline_templates_helper.rb | 22 +++
apps/workbench/app/helpers/provenance_helper.rb | 52 +++++--
apps/workbench/app/models/arvados_base.rb | 25 +++
apps/workbench/app/models/collection.rb | 2 +
apps/workbench/app/models/pipeline_instance.rb | 4 +-
.../app/views/application/_content.html.erb | 5 +-
.../app/views/application/_job_progress.html.erb | 20 +++
.../views/application/_job_status_label.html.erb | 11 ++
.../views/application/_pipeline_progress.html.erb | 8 +
.../application/_pipeline_status_label.html.erb | 13 ++
.../views/application/_selection_checkbox.html.erb | 8 +
.../app/views/application/_show_recent.html.erb | 9 +
.../app/views/collections/_index_tbody.html.erb | 3 +
.../app/views/collections/_show_files.html.erb | 48 ++++--
.../app/views/collections/_show_recent.html.erb | 7 +
.../workbench/app/views/jobs/_show_recent.html.erb | 18 +--
.../app/views/layouts/application.html.erb | 27 ++--
.../pipeline_instances/_show_components.html.erb | 74 +++++----
.../views/pipeline_instances/_show_recent.html.erb | 38 ++---
.../app/views/pipeline_instances/show.js.erb | 1 +
.../pipeline_templates/_show_attributes.html.erb | 38 +----
.../pipeline_templates/_show_components.html.erb | 8 +
.../_show_components_template.html.erb | 54 ++++++
.../pipeline_templates/_show_pipelines.html.erb | 2 +
.../views/pipeline_templates/_show_recent.html.erb | 22 +++
.../workbench/app/views/users/_show_admin.html.erb | 7 +
apps/workbench/app/views/users/_tables.html.erb | 72 ++-------
apps/workbench/config/application.default.yml | 66 ++++++++
apps/workbench/config/application.yml.example | 20 +++
.../config/initializers/zz_load_config.rb | 46 ++++++
apps/workbench/config/routes.rb | 4 +
apps/workbench/lib/tasks/config_check.rake | 8 +
.../ApiClientAuthorization.html.textile.liquid | 2 +-
doc/api/schema/AuthorizedKey.html.textile.liquid | 2 +-
doc/api/schema/Commit.html.textile.liquid | 2 +-
doc/api/schema/CommitAncestor.html.textile.liquid | 2 +-
doc/api/schema/Group.html.textile.liquid | 2 +-
doc/api/schema/Human.html.textile.liquid | 2 +-
doc/api/schema/KeepDisk.html.textile.liquid | 2 +-
doc/api/schema/Log.html.textile.liquid | 2 +-
doc/api/schema/Node.html.textile.liquid | 2 +-
.../schema/PipelineInstance.html.textile.liquid | 2 +-
.../schema/PipelineTemplate.html.textile.liquid | 2 +-
doc/api/schema/Repository.html.textile.liquid | 2 +-
doc/api/schema/Specimen.html.textile.liquid | 2 +-
doc/api/schema/Trait.html.textile.liquid | 2 +-
doc/api/schema/User.html.textile.liquid | 2 +-
doc/api/schema/VirtualMachine.html.textile.liquid | 2 +-
doc/install/install-api-server.html.md.liquid | 63 ++++----
doc/sdk/python/sdk-python.html.textile.liquid | 10 +-
sdk/cli/bin/arv-run-pipeline-instance | 74 +++++++--
sdk/python/arvados/collection.py | 1 +
sdk/python/bin/arv-normalize | 17 ++-
services/api/.gitignore | 1 +
services/api/Gemfile | 5 +
services/api/Gemfile.lock | 37 +++++
.../v1/api_client_authorizations_controller.rb | 1 +
services/api/app/models/arvados_model.rb | 2 +-
services/api/app/models/node.rb | 12 +-
services/api/app/models/pipeline_instance.rb | 4 +
services/api/config/application.default.yml | 86 ++++++++++
services/api/config/application.yml.example | 41 +++++
services/api/config/database.yml.sample | 6 +-
services/api/config/environments/test.rb.example | 7 +
services/api/config/initializers/zz_load_config.rb | 46 ++++++
...load_all_models.rb => zz_preload_all_models.rb} | 0
services/api/lib/tasks/config_check.rake | 8 +
services/api/script/crunch-dispatch.rb | 17 ++
.../api_client_authorizations_api_test.rb | 36 ++++
92 files changed, 1623 insertions(+), 327 deletions(-)
create mode 100644 apps/workbench/app/assets/javascripts/pipeline_instances.js
delete mode 100644 apps/workbench/app/assets/javascripts/pipeline_instances.js.coffee
create mode 100644 apps/workbench/app/assets/javascripts/selection.js
create mode 100644 apps/workbench/app/assets/stylesheets/selection.css
create mode 100644 apps/workbench/app/controllers/actions_controller.rb
create mode 100644 apps/workbench/app/views/application/_job_progress.html.erb
create mode 100644 apps/workbench/app/views/application/_job_status_label.html.erb
create mode 100644 apps/workbench/app/views/application/_pipeline_progress.html.erb
create mode 100644 apps/workbench/app/views/application/_pipeline_status_label.html.erb
create mode 100644 apps/workbench/app/views/application/_selection_checkbox.html.erb
create mode 100644 apps/workbench/app/views/pipeline_templates/_show_components.html.erb
create mode 100644 apps/workbench/app/views/pipeline_templates/_show_components_template.html.erb
create mode 100644 apps/workbench/app/views/pipeline_templates/_show_pipelines.html.erb
create mode 100644 apps/workbench/app/views/users/_show_admin.html.erb
create mode 100644 apps/workbench/config/application.default.yml
create mode 100644 apps/workbench/config/application.yml.example
create mode 100644 apps/workbench/config/initializers/zz_load_config.rb
create mode 100644 apps/workbench/lib/tasks/config_check.rake
create mode 100644 services/api/config/application.default.yml
create mode 100644 services/api/config/application.yml.example
create mode 100644 services/api/config/initializers/zz_load_config.rb
rename services/api/config/initializers/{preload_all_models.rb => zz_preload_all_models.rb} (100%)
create mode 100644 services/api/lib/tasks/config_check.rake
via c8060b94c485d5bf0e500d2321793cd56db4c856 (commit)
via 1586b85c89a9dce4799f9406a5a015f34313653c (commit)
via 0e3df3f0e82757edf23e548149324d3eb3d23726 (commit)
via e820bd1c6890f93ea1a84ffd5730bbf0e3d8e153 (commit)
via 9dfe2e44fec0ef4a59096d5734e27e6cba3d1869 (commit)
via c912d9d8d9e2a055a53967c5b01242c321dfbeb6 (commit)
via a2107d5fc7982769c2d667e51656a6e2529d9bc9 (commit)
via d182bbb9a552e3d87f5da11b4b5ade069c9eb089 (commit)
via 2ae14761e46c756dd6ac9efd91dda3a0824c649f (commit)
via c9f36fd25ba69edf08997d3bce57c8e2f7e2b6fc (commit)
via c7301d8983252bffde9ab48514a033f0d4df7e7f (commit)
via b31cc1c673b03aec2a77b81a6bfc1da676a9dc69 (commit)
via 0b1fb2bd766d117745188ea321de08c904711c49 (commit)
via 7cf55dce1df774d2c3daa3e54c0d4f27c38d4b11 (commit)
via 2c2815886a796d657f76312c6f6223146956ed9a (commit)
via 0b9dce85589ac5f259c8bf6cc30b23d5f99e2b97 (commit)
via 110b52c3e76c874c0e6216950f93ab5539143017 (commit)
via 906a7cae1fc6545750fa0557ea4a055d95f385e8 (commit)
via 535c58d7e2415a10a81d2d53b41c51709bd7e04f (commit)
via ac2db7d4aa32a772d9f21db3f1a8a63b1ad0ca2f (commit)
via ec89d136c5ba9beee861391cedb3ec93f28c9109 (commit)
via 7c3eb5137c7863947e6da221361ba98bfef227fd (commit)
via 26114a84293ea3fbcc5ef4adcf7900060716e62c (commit)
via fc6c801e7448c34b3b916813a8792e32f22bb7a8 (commit)
via 5420797c32e73347a79b5ecd8cdfbd212fd8aae8 (commit)
via 1d7f33382486f55ded52fea25271224b4ad88bd4 (commit)
via a7c1fecd8066bb6cfc1242ce1170716230e705bb (commit)
via 239cbf3997a084ae388ad89bdd7577f21d829251 (commit)
via ff7803d40cbfbf47a348d4e4eec7d6e48742bbeb (commit)
via 9ba66dcc4f4c166fa08512ce0c75e324f26c7b0d (commit)
via 5ddf9df205f089634cc39b8398dfee5e36faac87 (commit)
via 03bee5d2ecc62b0fe7aaae67e8d5fffcdeeb4880 (commit)
via 720512e987798e4135254e50d920d7ccd4cba6c2 (commit)
via 19af0137f1bfa57bbb717e488ed5d9967b9cfbe8 (commit)
via 551fad0465af5ee41b091d3ea76f7c2ade1a4386 (commit)
via 24e38a335377c878955e302cd11b2097cd7c5e07 (commit)
via fb35b803418d6f732af4273dff8d0485f02f8290 (commit)
via 74aa6539fccff9b135f3edec58801976b9a51538 (commit)
via fd02589a3107d0fd02a26668c44ecbff7c729081 (commit)
via d1e378c28ab57bd0d68a09343e84628202c404cc (commit)
via 41c7c826a7e4c3a074a6ab5a719bf4c88e9a0e28 (commit)
via 38b9c64d051ebf0d1e430c498249caf608dcce2f (commit)
via ac5a69c5c0aaf0786023caa4599a6c55d67310bc (commit)
via 550e20e00518ce51054e9c52549e77f74d033eba (commit)
via 7d0e688094e19f54f966747c8dbfbd00e7ce5149 (commit)
via f26cbf1c4d949d3e7c7b26ab27c5f4d48d8059ed (commit)
via 3baf79475a93929350590d17a95b636408cd603e (commit)
via 89355aa0e2727373fa60c781ec6c00c31a79a7dc (commit)
via 9e778a62184d4604f62e6c30fec8d1be1781de4b (commit)
via da5ff6947c567dfb391af544473475c029a78ece (commit)
via cf1e0b3f31b643899b556c3c7ae59630a0ec7495 (commit)
via 52838f7dfc576e8a11411fd9f1710a758573a6e7 (commit)
via da2803a65e696bf85883e82a0bda6ef81dda5429 (commit)
via b354e03622eb2e47c055b6fcc38b24c22a59ab9f (commit)
via ad8e91c2c580b2a6188fccafb05672b7130ec931 (commit)
via 98f0657745f2f38c19047ef9039c52c1b0fe0659 (commit)
via e2bee889bc406f30b66337d823242869abe7e98d (commit)
via bed3cfb9cce29a86e66201807c2289b79c34efcd (commit)
from c7ee682e45f191903e5f82b0b5104aa236cfe2e0 (commit)
Those revisions listed above that are new to this repository have
not appeared on any other notification email; so we list those
revisions in full, below.
commit c8060b94c485d5bf0e500d2321793cd56db4c856
Merge: c7ee682 1586b85
Author: Tim Pierce <twp at curoverse.com>
Date: Tue Mar 11 10:13:25 2014 -0400
Merge branch 'master' into 2221-complete-docker
-----------------------------------------------------------------------
hooks/post-receive
--
More information about the arvados-commits
mailing list