[ARVADOS] updated: 783343e5aca00f730315d943cecf74e4277a38e7
git at public.curoverse.com
git at public.curoverse.com
Mon Jun 16 10:20:19 EDT 2014
Summary of changes:
.../app/assets/javascripts/application.js | 5 +
apps/workbench/app/assets/javascripts/editable.js | 14 +-
.../workbench/app/assets/javascripts/filterable.js | 42 ++++
apps/workbench/app/assets/javascripts/folders.js | 12 -
.../app/assets/javascripts/infinite_scroll.js | 53 +++++
.../app/assets/javascripts/pipeline_instances.js | 41 +++-
.../app/assets/javascripts/select_modal.js | 33 ++-
apps/workbench/app/assets/javascripts/selection.js | 53 ++++-
.../app/assets/stylesheets/application.css.scss | 77 ++++--
.../app/assets/stylesheets/folders.css.scss | 13 -
.../workbench/app/assets/stylesheets/jobs.css.scss | 13 +-
.../app/assets/stylesheets/projects.css.scss | 12 +
.../app/assets/stylesheets/select_modal.css.scss | 12 +
.../app/controllers/actions_controller.rb | 57 ++++-
.../app/controllers/application_controller.rb | 265 ++++++++++++++++++---
.../app/controllers/collections_controller.rb | 24 +-
.../app/controllers/folders_controller.rb | 118 ---------
.../workbench/app/controllers/groups_controller.rb | 9 +-
apps/workbench/app/controllers/jobs_controller.rb | 2 +-
.../controllers/pipeline_instances_controller.rb | 56 ++++-
.../controllers/pipeline_templates_controller.rb | 3 +-
.../app/controllers/projects_controller.rb | 134 +++++++++++
apps/workbench/app/controllers/users_controller.rb | 1 -
apps/workbench/app/helpers/application_helper.rb | 138 +++++++++--
apps/workbench/app/helpers/folders_helper.rb | 2 -
.../app/helpers/pipeline_instances_helper.rb | 5 +
apps/workbench/app/helpers/projects_helper.rb | 2 +
apps/workbench/app/models/arvados_base.rb | 40 +++-
apps/workbench/app/models/collection.rb | 9 +-
apps/workbench/app/models/group.rb | 4 +-
apps/workbench/app/models/human.rb | 2 +-
apps/workbench/app/models/job.rb | 21 +-
apps/workbench/app/models/link.rb | 4 +
apps/workbench/app/models/pipeline_instance.rb | 10 +-
apps/workbench/app/models/pipeline_template.rb | 2 +-
apps/workbench/app/models/specimen.rb | 2 +-
apps/workbench/app/models/trait.rb | 2 +-
.../views/application/_arvados_attr_value.html.erb | 2 +-
.../app/views/application/_choose.html.erb | 31 +++
.../views/{folders => application}/_choose.js.erb | 2 +-
.../app/views/application/_content.html.erb | 25 +-
.../app/views/application/_content_layout.html.erb | 5 +-
.../application/_delete_object_button.html.erb | 2 +-
.../views/application/_selection_checkbox.html.erb | 2 +-
.../app/views/application/_show_advanced.html.erb | 23 ++
.../_show_advanced_api_response.html.erb | 3 +
.../_show_advanced_cli_example.html.erb | 8 +
.../_show_advanced_curl_example.html.erb | 9 +
.../application/_show_advanced_metadata.html.erb | 56 +++++
.../_show_advanced_python_example.html.erb | 5 +
.../app/views/application/_show_json.html.erb | 3 -
.../app/views/application/_show_metadata.html.erb | 70 ------
.../views/application/_show_object_button.html.erb | 16 +-
.../_show_object_description_cell.html.erb | 2 +
.../app/views/application/_show_recent.html.erb | 4 +-
.../app/views/application/_svg_div.html.erb | 4 +-
.../workbench/app/views/application/index.html.erb | 16 +-
apps/workbench/app/views/application/show.html.erb | 3 +-
.../workbench/app/views/collections/_choose.js.erb | 1 +
.../app/views/collections/_choose_rows.html.erb | 17 ++
.../app/views/collections/_index_tbody.html.erb | 4 +-
.../app/views/collections/_show_files.html.erb | 12 +-
.../_show_object_description_cell.html.erb | 14 ++
.../app/views/collections/_show_recent.html.erb | 4 +-
apps/workbench/app/views/collections/show.html.erb | 45 ++--
.../app/views/folders/_show_folders.html.erb | 29 ---
apps/workbench/app/views/folders/show.html.erb | 214 -----------------
.../app/views/jobs/_show_details.html.erb | 1 +
.../jobs/_show_object_description_cell.html.erb | 15 ++
.../app/views/layouts/application.html.erb | 250 +++++++++----------
.../pipeline_instances/_component_labels.html.erb | 5 +
.../pipeline_instances/_show_compare.html.erb | 5 +-
.../pipeline_instances/_show_components.html.erb | 191 ++++++---------
.../views/pipeline_instances/_show_inputs.html.erb | 17 +-
.../_show_object_description_cell.html.erb | 4 +
.../views/pipeline_instances/_show_recent.html.erb | 19 --
.../app/views/pipeline_instances/compare.html.erb | 14 ++
.../app/views/pipeline_instances/show.html.erb | 56 ++++-
.../app/views/pipeline_templates/_choose.js.erb | 1 +
.../views/pipeline_templates/_choose_rows.html.erb | 11 +
.../views/{folders => projects}/_choose.html.erb | 22 +-
apps/workbench/app/views/projects/_choose.js.erb | 1 +
.../projects/_index_jobs_and_pipelines.html.erb | 26 ++
.../app/views/projects/_index_projects.html.erb | 31 +++
.../app/views/projects/_show_contents.html.erb | 122 ++++++++++
.../views/projects/_show_contents_rows.html.erb | 30 +++
.../app/views/projects/_show_featured.html.erb | 18 ++
.../app/views/projects/_show_permissions.html.erb | 44 ++++
apps/workbench/app/views/projects/index.html.erb | 79 ++++++
.../remove_items.js.erb} | 0
apps/workbench/app/views/users/_home.html.erb | 2 +-
apps/workbench/app/views/users/inactive.html.erb | 22 ++
apps/workbench/app/views/users/welcome.html.erb | 45 ++--
apps/workbench/config/routes.rb | 11 +-
.../test/functional/collections_controller_test.rb | 20 +-
.../test/functional/folders_controller_test.rb | 7 -
.../test/functional/projects_controller_test.rb | 12 +
.../test/functional/users_controller_test.rb | 3 +-
.../workbench/test/integration/collections_test.rb | 7 +-
apps/workbench/test/integration/folders_test.rb | 83 -------
apps/workbench/test/integration/logins_test.rb | 5 +-
.../test/integration/pipeline_instances_test.rb | 115 ++++++++-
apps/workbench/test/integration/projects_test.rb | 87 +++++++
apps/workbench/test/integration/smoke_test.rb | 4 +-
apps/workbench/test/integration/users_test.rb | 47 ++--
.../test/integration/virtual_machines_test.rb | 5 +-
.../test/unit/arvados_resource_list_test.rb | 12 +-
apps/workbench/test/unit/group_test.rb | 12 +-
.../test/unit/helpers/folders_helper_test.rb | 4 -
...oups_helper_test.rb => projects_helper_test.rb} | 0
...0607150616_rename_folder_to_project.rb_deferred | 9 +
services/api/test/fixtures/groups.yml | 14 +-
services/api/test/fixtures/links.yml | 20 +-
services/api/test/fixtures/pipeline_instances.yml | 16 ++
services/api/test/fixtures/specimens.yml | 8 +-
.../api/test/functional/arvados/v1/filters_test.rb | 4 +-
.../arvados/v1/groups_controller_test.rb | 42 ++--
.../functional/arvados/v1/links_controller_test.rb | 6 +-
.../functional/arvados/v1/users_controller_test.rb | 2 +-
services/api/test/unit/group_test.rb | 2 +-
services/api/test/unit/link_test.rb | 10 +-
services/api/test/unit/owner_test.rb | 2 +-
services/fuse/tests/test_mount.py | 8 +-
123 files changed, 2334 insertions(+), 1197 deletions(-)
create mode 100644 apps/workbench/app/assets/javascripts/filterable.js
delete mode 100644 apps/workbench/app/assets/javascripts/folders.js
create mode 100644 apps/workbench/app/assets/javascripts/infinite_scroll.js
delete mode 100644 apps/workbench/app/assets/stylesheets/folders.css.scss
create mode 100644 apps/workbench/app/assets/stylesheets/projects.css.scss
delete mode 100644 apps/workbench/app/controllers/folders_controller.rb
create mode 100644 apps/workbench/app/controllers/projects_controller.rb
delete mode 100644 apps/workbench/app/helpers/folders_helper.rb
create mode 100644 apps/workbench/app/helpers/projects_helper.rb
create mode 100644 apps/workbench/app/views/application/_choose.html.erb
rename apps/workbench/app/views/{folders => application}/_choose.js.erb (88%)
create mode 100644 apps/workbench/app/views/application/_show_advanced.html.erb
create mode 100644 apps/workbench/app/views/application/_show_advanced_api_response.html.erb
create mode 100644 apps/workbench/app/views/application/_show_advanced_cli_example.html.erb
create mode 100644 apps/workbench/app/views/application/_show_advanced_curl_example.html.erb
create mode 100644 apps/workbench/app/views/application/_show_advanced_metadata.html.erb
create mode 100644 apps/workbench/app/views/application/_show_advanced_python_example.html.erb
delete mode 100644 apps/workbench/app/views/application/_show_json.html.erb
delete mode 100644 apps/workbench/app/views/application/_show_metadata.html.erb
create mode 100644 apps/workbench/app/views/application/_show_object_description_cell.html.erb
create mode 120000 apps/workbench/app/views/collections/_choose.js.erb
create mode 100644 apps/workbench/app/views/collections/_choose_rows.html.erb
create mode 100644 apps/workbench/app/views/collections/_show_object_description_cell.html.erb
delete mode 100644 apps/workbench/app/views/folders/_show_folders.html.erb
delete mode 100644 apps/workbench/app/views/folders/show.html.erb
create mode 100644 apps/workbench/app/views/jobs/_show_details.html.erb
create mode 100644 apps/workbench/app/views/jobs/_show_object_description_cell.html.erb
create mode 100644 apps/workbench/app/views/pipeline_instances/_component_labels.html.erb
create mode 100644 apps/workbench/app/views/pipeline_instances/_show_object_description_cell.html.erb
mode change 120000 => 100644 apps/workbench/app/views/pipeline_instances/show.html.erb
create mode 120000 apps/workbench/app/views/pipeline_templates/_choose.js.erb
create mode 100644 apps/workbench/app/views/pipeline_templates/_choose_rows.html.erb
rename apps/workbench/app/views/{folders => projects}/_choose.html.erb (52%)
create mode 120000 apps/workbench/app/views/projects/_choose.js.erb
create mode 100644 apps/workbench/app/views/projects/_index_jobs_and_pipelines.html.erb
create mode 100644 apps/workbench/app/views/projects/_index_projects.html.erb
create mode 100644 apps/workbench/app/views/projects/_show_contents.html.erb
create mode 100644 apps/workbench/app/views/projects/_show_contents_rows.html.erb
create mode 100644 apps/workbench/app/views/projects/_show_featured.html.erb
create mode 100644 apps/workbench/app/views/projects/_show_permissions.html.erb
create mode 100644 apps/workbench/app/views/projects/index.html.erb
rename apps/workbench/app/views/{folders/remove_item.js.erb => projects/remove_items.js.erb} (100%)
create mode 100644 apps/workbench/app/views/users/inactive.html.erb
delete mode 100644 apps/workbench/test/functional/folders_controller_test.rb
create mode 100644 apps/workbench/test/functional/projects_controller_test.rb
delete mode 100644 apps/workbench/test/integration/folders_test.rb
create mode 100644 apps/workbench/test/integration/projects_test.rb
delete mode 100644 apps/workbench/test/unit/helpers/folders_helper_test.rb
copy apps/workbench/test/unit/helpers/{groups_helper_test.rb => projects_helper_test.rb} (100%)
create mode 100644 services/api/db/migrate/20140607150616_rename_folder_to_project.rb_deferred
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commit 783343e5aca00f730315d943cecf74e4277a38e7
Merge: 525c942 63c7773
Author: Tim Pierce <twp at curoverse.com>
Date: Fri Jun 13 17:24:42 2014 -0400
Merge branch 'master' into 2934-limit-crunch-logs
Refs #2934
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