[ARVADOS] updated: 31351d3a55ca31c97a6f098a897a1179caacd701

[git at public.curoverse.com]

Summary of changes:
 docker/bcbio-nextgen/Dockerfile | 10 +++++-----
 1 file changed, 5 insertions(+), 5 deletions(-)

       via  31351d3a55ca31c97a6f098a897a1179caacd701 (commit)
      from  945bebae56ec2fb5faef965cbf55fc8309e8df11 (commit)

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commit 31351d3a55ca31c97a6f098a897a1179caacd701
Author: Peter Amstutz <peter.amstutz at curoverse.com>
Date:   Wed Jul 2 11:12:50 2014 -0400

    Should probably wait to install ruby before setting GEM_HOME and friends.

diff --git a/docker/bcbio-nextgen/Dockerfile b/docker/bcbio-nextgen/Dockerfile
index e3e705b..dfb4ea1 100644
--- a/docker/bcbio-nextgen/Dockerfile
+++ b/docker/bcbio-nextgen/Dockerfile
@@ -3,17 +3,17 @@ MAINTAINER Peter Amstutz <peter.amstutz at curoverse.com>
 
 USER root
 
-ADD generated/arvados.tar.gz /usr/src/arvados/
-ENV GEM_HOME /usr/local/rvm/gems/ruby-2.1.0
-ENV GEM_PATH /usr/local/rvm/gems/ruby-2.1.0:/usr/local/rvm/gems/ruby-2.1.0 at global
-ENV PATH /usr/local/rvm/gems/ruby-2.1.0/bin:/usr/local/rvm/gems/ruby-2.1.0 at global/bin:/usr/local/rvm/rubies/ruby-2.1.0/bin:/usr/local/rvm/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
-
 # Install Ruby 2.1.0
 RUN apt-get remove --quiet --assume-yes ruby && \
     curl -L https://get.rvm.io | bash -s stable && \
     /usr/local/rvm/bin/rvm install 2.1.0 && \
     /bin/mkdir -p /usr/src/arvados
 
+ADD generated/arvados.tar.gz /usr/src/arvados/
+ENV GEM_HOME /usr/local/rvm/gems/ruby-2.1.0
+ENV GEM_PATH /usr/local/rvm/gems/ruby-2.1.0:/usr/local/rvm/gems/ruby-2.1.0 at global
+ENV PATH /usr/local/rvm/gems/ruby-2.1.0/bin:/usr/local/rvm/gems/ruby-2.1.0 at global/bin:/usr/local/rvm/rubies/ruby-2.1.0/bin:/usr/local/rvm/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
+
 # Install dependencies and set up system.
 # The FUSE packages help ensure that we can install the Python SDK (arv-mount).
 RUN /usr/bin/apt-get update && \

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