[ARVADOS] updated: fad433ed99dffb9fd003c5dfd5f7bad770b19206

git at public.curoverse.com git at public.curoverse.com
Sun Aug 3 16:19:44 EDT 2014


Summary of changes:
 apps/workbench/Gemfile                             |   1 +
 apps/workbench/Gemfile.lock                        |   2 +
 .../workbench/app/assets/javascripts/filterable.js |   4 +-
 .../app/assets/javascripts/select_modal.js         |  51 ++++++++++++++--
 .../app/controllers/actions_controller.rb          |   6 +-
 .../app/controllers/application_controller.rb      |   4 +-
 .../workbench/app/controllers/search_controller.rb |  13 +++-
 apps/workbench/app/controllers/users_controller.rb |  67 +++++++++++++++++++++
 apps/workbench/app/views/application/404.html.erb  |   7 ++-
 .../workbench/app/views/application/_choose.js.erb |   1 -
 .../workbench/app/views/application/index.html.erb |   2 +
 apps/workbench/app/views/layouts/body.html.erb     |  53 ++++++++--------
 .../app/views/search/_choose_rows.html.erb         |   8 ++-
 .../app/views/users/_add_ssh_key_popup.html.erb    |  38 ++++++++++++
 .../app/views/users/_manage_account.html.erb       |  52 ++++++++++++++++
 .../app/views/users/_manage_current_token.html.erb |  13 ++++
 .../app/views/users/_manage_repositories.html.erb  |  40 ++++++++++++
 .../app/views/users/_manage_ssh_keys.html.erb      |  55 +++++++++++++++++
 .../views/users/_manage_virtual_machines.html.erb  |  50 +++++++++++++++
 apps/workbench/app/views/users/add_ssh_key.js.erb  |   2 +
 .../app/views/users/add_ssh_key_popup.js.erb       |   8 +++
 .../app/views/users/manage_account.html.erb        |   1 +
 apps/workbench/config/routes.rb                    |   3 +
 doc/_includes/_ssh_addkey.liquid                   |  10 +--
 doc/images/ssh-adding-public-key.png               | Bin 17463 -> 15117 bytes
 doc/user/reference/api-tokens.html.textile.liquid  |  39 +++---------
 docker/build_tools/Makefile                        |  30 +++++----
 docker/build_tools/list_generated_files            |  14 -----
 services/api/Gemfile                               |   1 +
 services/api/Gemfile.lock                          |   2 +
 .../controllers/arvados/v1/groups_controller.rb    |  28 +++++----
 .../app/controllers/arvados/v1/jobs_controller.rb  |  20 +++---
 services/api/app/models/arvados_model.rb           |   6 ++
 services/api/app/models/authorized_key.rb          |   9 +--
 ... => 20140607150616_rename_folder_to_project.rb} |   0
 .../db/migrate/20140714184006_empty_collection.rb  |   4 +-
 services/api/db/structure.sql                      |   2 +
 services/api/lib/current_api_client.rb             |   2 +-
 .../test/fixtures/api_client_authorizations.yml    |   6 ++
 services/api/test/fixtures/links.yml               |  46 ++++++++++++++
 services/api/test/fixtures/users.yml               |  11 ++++
 .../arvados/v1/groups_controller_test.rb           |  33 ++++++++++
 .../arvados/v1/job_reuse_controller_test.rb        |  21 +++++++
 services/fuse/tests/test_mount.py                  |   1 +
 44 files changed, 628 insertions(+), 138 deletions(-)
 create mode 100644 apps/workbench/app/views/users/_add_ssh_key_popup.html.erb
 create mode 100644 apps/workbench/app/views/users/_manage_account.html.erb
 create mode 100644 apps/workbench/app/views/users/_manage_current_token.html.erb
 create mode 100644 apps/workbench/app/views/users/_manage_repositories.html.erb
 create mode 100644 apps/workbench/app/views/users/_manage_ssh_keys.html.erb
 create mode 100644 apps/workbench/app/views/users/_manage_virtual_machines.html.erb
 create mode 100644 apps/workbench/app/views/users/add_ssh_key.js.erb
 create mode 100644 apps/workbench/app/views/users/add_ssh_key_popup.js.erb
 create mode 100644 apps/workbench/app/views/users/manage_account.html.erb
 delete mode 100755 docker/build_tools/list_generated_files
 rename services/api/db/migrate/{20140607150616_rename_folder_to_project.rb_deferred => 20140607150616_rename_folder_to_project.rb} (100%)

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commit fad433ed99dffb9fd003c5dfd5f7bad770b19206
Merge: f0a746b 80ada06
Author: Ward Vandewege <ward at curoverse.com>
Date:   Sun Aug 3 22:17:15 2014 +0200

    Merge branch 'master' into 3261-keep-docker-config


commit f0a746bb545d7db0760cd397c849315787c5231a
Author: Ward Vandewege <ward at curoverse.com>
Date:   Sun Aug 3 22:16:59 2014 +0200

    3261: simplify Makefile

diff --git a/docker/build_tools/Makefile b/docker/build_tools/Makefile
index 240e820..09c09cc 100644
--- a/docker/build_tools/Makefile
+++ b/docker/build_tools/Makefile
@@ -52,8 +52,6 @@ deepclean: clean
 
 CONFIG_RB = build_tools/config.rb
 
-LIST_GENERATED_FILES = build_tools/list_generated_files
-
 BUILD = build/.buildstamp
 
 BASE_DEPS = base/Dockerfile config.yml $(BASE_GENERATED)
@@ -84,26 +82,26 @@ BCBIO_NEXTGEN_DEPS = bcbio-nextgen/Dockerfile
 
 BASE_GENERATED = base/generated/arvados.tar.gz
 
-COMPUTE_GENERATED_IN   = $(shell ls compute/*.in)
-COMPUTE_GENERATED      = $(shell $(LIST_GENERATED_FILES) $(COMPUTE_GENERATED_IN))
+COMPUTE_GENERATED_IN   = compute/*.in
+COMPUTE_GENERATED      = compute/generated/*
 
-KEEP_GENERATED_IN      = $(shell ls keep/*.in)
-KEEP_GENERATED         = $(shell $(LIST_GENERATED_FILES) $(KEEP_GENERATED_IN))
+KEEP_GENERATED_IN      = keep/*.in
+KEEP_GENERATED         = keep/generated/*
 
-API_GENERATED_IN       = $(shell ls api/*.in)
-API_GENERATED          = $(shell $(LIST_GENERATED_FILES) $(API_GENERATED_IN))
+API_GENERATED_IN       = api/*.in
+API_GENERATED          = api/generated/*
 
-SHELL_GENERATED_IN     = $(shell ls shell/*.in)
-SHELL_GENERATED        = $(shell $(LIST_GENERATED_FILES) $(SHELL_GENERATED_IN))
+SHELL_GENERATED_IN     = shell/*.in
+SHELL_GENERATED        = shell/generated/*
 
-SLURM_GENERATED_IN     = $(shell ls slurm/*.in)
-SLURM_GENERATED        = $(shell $(LIST_GENERATED_FILES) $(SLURM_GENERATED_IN))
+SLURM_GENERATED_IN     = slurm/*.in
+SLURM_GENERATED        = slurm/generated/*
 
-WORKBENCH_GENERATED_IN = $(shell ls workbench/*.in)
-WORKBENCH_GENERATED    = $(shell $(LIST_GENERATED_FILES) $(WORKBENCH_GENERATED_IN))
+WORKBENCH_GENERATED_IN = workbench/*.in
+WORKBENCH_GENERATED    = workbench/generated/*
 
-SSO_GENERATED_IN       = $(shell ls sso/*.in)
-SSO_GENERATED          = $(shell $(LIST_GENERATED_FILES) $(SSO_GENERATED_IN))
+SSO_GENERATED_IN       = sso/*.in
+SSO_GENERATED          = sso/generated/*
 
 $(BUILD):
 	mkdir -p build
diff --git a/docker/build_tools/list_generated_files b/docker/build_tools/list_generated_files
deleted file mode 100755
index 170ee53..0000000
--- a/docker/build_tools/list_generated_files
+++ /dev/null
@@ -1,14 +0,0 @@
-#! /usr/bin/env ruby
-
-# list_generated_files file1 file2...
-#
-# Prints a list of the "generated" files that correspond to the files
-# listed on the command line.
-#
-# e.g.:
-# list_generated_files keep/config.rb.in api/application.yml.in
-# -> keep/generated/config.rb api/generated/application.yml
-
-print ARGV.collect { |f|
-  File.join(File.dirname(f), "generated", File.basename(f, ".in"))
-}.join(" "), "\n"

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